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SCNpilot_BF_INOC_scaffold_4012_1

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(3..1457)

Top 3 Functional Annotations

Value Algorithm Source
cation/multidrug efflux pump transmembrane protein; K07788 RND superfamily, multidrug transport protein MdtB id=12493017 bin=THIO_HI species=Herbaspirillum seropedicae genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 485.0
  • Bit_score: 910
  • Evalue 7.90e-262
Cation/multidrug efflux pump transmembrane protein {ECO:0000313|EMBL:EIJ46733.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 485.0
  • Bit_score: 760
  • Evalue 1.90e-216
cation/multidrug efflux pump transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 485.0
  • Bit_score: 758
  • Evalue 8.40e-217

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Taxonomy

Herbaspirillum sp. GW103 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1455
GTGAACCCCTCGCGGCTTTTCATCCTGCGGCCGGTGGCCACCTCGCTGCTGATGCTGGCCATCCTGCTGGCCGGCGCGGTGGCGTTTCGTCTGCTGCCGCTGTCGGCGCTGCCCGAGGTGGACTACCCGACCATCCAGATCATGTCGCTCTATCCGGGGGCCAGCCCCGACGTCATCACCGCCACCCTCACTGCACCGCTGGAACGACAGCTCGGGCAGATGCCCGGCCTCCGGGAAATGTCCTCGACCAGTTCCGGCGGCGCCTCGGTCATCACGCTGCGCTTCAGTCTCGACCTGACGCTGGACGTGGCCGAACAGGAAGTGCAGGCCGCCATCAACGCCGCGTCCAACCTGCTGCCGACCGACATGCCGATGCCGCCGGTCTACAGCAAGATCAATCCGGCCGACGCCCCCGTCCTCACCCTGGCGGTGACCTCGCCATCGCTGCCGCTGGCGCGCCTGCACGACCTGGTGGAAAACCGCATCGCGCAAAAGATTTCGCAACTGCCAGGCGTCGGCCTGGTCAGCCTGGCCGGCGGCCGGCGGCCGGCGGTGCGTATCCAGGTCAATCCCCGAGCGCTGGCCGCATCGGGCTTGTCGCTCGAGGATCTGCGCGCGGCCATCGGCACGGCCAACGTCAACACGCCCAAGGGCAGCTTCGACGGGGCGCTGCGCGCGTCGGCGATCGACGCCAACGACCAGTTGAAATCGGCCGACGACTACGTCAATCTGATCATTGCCTACAAAAACGGCGCGCCGATCCGCCTGCGGGATGTGGCGGATGTCATTGACAGTGCCGAGAACACGCGGCTGGCGGCCTGGGCCAACACGCGCCCGGGGGTGATTCTCAATGTGCAGCGCCAGCCCGGCGCCAACGTCATCGCGGTCACCGACCGCATCAAGGCCGCCCTGCCCGGCCTGCAGGCCAGTCTGCCGGGATCGGTCGACGTCACGCTGCTGTCCGACCGCACGGTCACCATTCGGGCCTCGGTGGCCGATGTGGAATTCTCGCTGCTGCTGGCGGTGGCGCTGGTGGTGATGGTGATCTACCTGTTCCTGCGCAAGGTCCCGGCGACGATCATTCCCAGCCTCGCGGTACCCATCTCGCTGGTCGGCACCTTCGGCGTCATGTACCTGGCCGGCTTCTCCATCAACAACCTGACCCTGATGGCGCTGACCATCGCCACCGGTTTCGTGGTCGACGACGCCATCGTGGTCATCGAGAACATCACGCGCCACATCGAGGAGGGCGAACCGCCGCTGGACGCCGCACTGAAGGGATCGAAGCAGATCGGCTTCACCATCATCTCGCTGACCTTCTCGCTGATTGCCGTGCTGATCCCGCTGCTGTTCATGGGCGACGTGGTCGGCCGGCTGTTCCACGAGTTCGCCATCACCCTGGCGGTGGCCATCCTGATTTCTGCCGTGGTGTCGCTGACCTTGACGCCGATGCTG
PROTEIN sequence
Length: 485
VNPSRLFILRPVATSLLMLAILLAGAVAFRLLPLSALPEVDYPTIQIMSLYPGASPDVITATLTAPLERQLGQMPGLREMSSTSSGGASVITLRFSLDLTLDVAEQEVQAAINAASNLLPTDMPMPPVYSKINPADAPVLTLAVTSPSLPLARLHDLVENRIAQKISQLPGVGLVSLAGGRRPAVRIQVNPRALAASGLSLEDLRAAIGTANVNTPKGSFDGALRASAIDANDQLKSADDYVNLIIAYKNGAPIRLRDVADVIDSAENTRLAAWANTRPGVILNVQRQPGANVIAVTDRIKAALPGLQASLPGSVDVTLLSDRTVTIRASVADVEFSLLLAVALVVMVIYLFLRKVPATIIPSLAVPISLVGTFGVMYLAGFSINNLTLMALTIATGFVVDDAIVVIENITRHIEEGEPPLDAALKGSKQIGFTIISLTFSLIAVLIPLLFMGDVVGRLFHEFAITLAVAILISAVVSLTLTPML