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SCNpilot_BF_INOC_scaffold_38608_2

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: 174..1064

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoS n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E4213 similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 297.0
  • Bit_score: 568
  • Evalue 4.50e-159
RNA polymerase sigma factor RpoS similarity KEGG
DB: KEGG
  • Identity: 92.3
  • Coverage: 300.0
  • Bit_score: 548
  • Evalue 1.40e-153
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=292415 species="Bacteria; Proteobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 300.0
  • Bit_score: 548
  • Evalue 6.80e-153

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGAGCCGTGAATCCAGTGACGAATCCGAAGACCTGACGCCAGACGATGCCGAAGCGGCACAGCCGGCGGCGGACAGCAGCGAGGAACTGGCGTCGGCCATCCTCGACGAGCCGCAGGTCGACGTCACCCAGCTCTATCTCAACGAAATCGGCCAGGCGCCGCTGCTGACCGCGGCGGAGGAAGTCGCGCTGGCGCGGCGCACCGTGTTGGGCGACTTCGAGGCGCGCCAGACCATGATCGAGCGCAACCTGCGGCTGGTGGTCAACATCGCCAAGCATTACGCCAACCGCGGCCTGACGCTGCTCGACCTGGTCGAGGAGGGCAACCTCGGACTGATCCACGCGCTGGAAAAATTCGATCCCGAGCGCGGTTTCCGCTTCTCCACCTATGCCACCTGGTGGATCCGCCAGAACATCGAGCGCGCGATCATGAACCAGTCGCGCACCATCCGCCTGCCGGTGCACATCATCAAGGAACTCAACATCTACCTGCGCGCCAAGCGGCATCTGGAAACCCACGGCGTGACCGACGCCACCTCGGACGACATCGCCGCGCTGACCGGCCATCCGGTCGAGGACGTGCGCCGCATCATGCGGCTGAACGAGAGAGTGGCATCGCTCGATGCGCCGCTCGAGGTCGACCCCACGCTGTCGCTGGGCGAAACGATCGCCGACGACAATGTCCATCTGCCGGACGAAATGCTGCAGGTCGAGGAAATCGAACACCATGTCCGCGAATGGCTGACCCAGCTCAACGACAAGCAGCGCTGGGTGATCGAGCGGCGCTTCGGCCTGAACGGCTGTGAAGCCTGCACGCTGGAAGACCTGGCGCTCGAACTGCAGGTGACGCGCGAGCGTGTGCGCCAGATCCAGATGGAATCCCTGCGCGTG
PROTEIN sequence
Length: 297
MSRESSDESEDLTPDDAEAAQPAADSSEELASAILDEPQVDVTQLYLNEIGQAPLLTAAEEVALARRTVLGDFEARQTMIERNLRLVVNIAKHYANRGLTLLDLVEEGNLGLIHALEKFDPERGFRFSTYATWWIRQNIERAIMNQSRTIRLPVHIIKELNIYLRAKRHLETHGVTDATSDDIAALTGHPVEDVRRIMRLNERVASLDAPLEVDPTLSLGETIADDNVHLPDEMLQVEEIEHHVREWLTQLNDKQRWVIERRFGLNGCEACTLEDLALELQVTRERVRQIQMESLRV