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SCNpilot_BF_INOC_scaffold_263

Search features with annotation key words

Displaying items 31-60 of 192 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_263_31
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29273..29458
DNA (186bp) protein (62aa)
hypothetical protein; K09937 hypothetical protein id=12498016 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein; K09937 hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_263_32
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29463..30419
DNA (957bp) protein (319aa)
ATP phosphoribosyltransferase regulatory subunit; K02502 ATP phosphoribosyltransferase regulatory subunit id=12498017 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ATP phosphoribosyltransferase regulatory subunit; K02502 ATP phosphoribosyltransferase regulatory subunit Tax=GWE1_Thiobacillus_62_9_curated
ATP phosphoribosyltransferase
SCNpilot_BF_INOC_scaffold_263_33
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30445..31743
DNA (1299bp) protein (433aa)
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] id=12498018 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000255|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000255|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000255|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000255|HAMAP-Rule:MF_00
SCNpilot_BF_INOC_scaffold_263_34
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31924..34251
DNA (2328bp) protein (776aa)
RNAse R (EC:3.1.-.-); K12573 ribonuclease R [EC:3.1.-.-] id=12498019 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=292415 species="Bacteria; Proteobacteria; Beta
RNAse R (EC:3.1.-.-)
SCNpilot_BF_INOC_scaffold_263_35
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34248..34994
DNA (747bp) protein (249aa)
RNA methyltransferase TrmH; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] id=12498020 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
RNA methyltransferase TrmH; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RNA methyltransferase TrmH
SCNpilot_BF_INOC_scaffold_263_36
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35005..35208
DNA (204bp) protein (68aa)
hypothetical protein id=12498021 bin=THIO_MID species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_263_37
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35220..35894
DNA (675bp) protein (225aa)
TPR repeat-containing protein id=12498022 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
TPR repeat-containing protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
TPR repeat-containing protein
SCNpilot_BF_INOC_scaffold_263_38
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36032..36730
DNA (699bp) protein (233aa)
hypothetical protein id=12498023 bin=THIO_MID species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=BJP_08E140C01_Dechloromonas_61_78
SCNpilot_BF_INOC_scaffold_263_39
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36755..37471
DNA (717bp) protein (239aa)
hypothetical protein id=12498024 bin=THIO_MID species=Methylobacillus flagellatus genus=Methylobacillus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Dechloromonas_61_78
SCNpilot_BF_INOC_scaffold_263_40
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37605..39845
DNA (2241bp) protein (747aa)
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein id=12498025 bin=THIO_MID species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
TonB-dependent receptor
Tax=BJP_08E140C01_Dechloromonas_61_78
SCNpilot_BF_INOC_scaffold_263_41
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39857..40807)
DNA (951bp) protein (317aa)
glycosyltransferase id=12498026 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
glycosyltransferase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
glycosyltransferase
SCNpilot_BF_INOC_scaffold_263_42
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40895..41674
DNA (780bp) protein (260aa)
tRNA/rRNA methyltransferase; K03437 RNA methyltransferase, TrmH family id=12498027 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
tRNA/rRNA methyltransferase; K03437 RNA methyltransferase, TrmH family Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
tRNA/rRNA methyltransferase
SCNpilot_BF_INOC_scaffold_263_43
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41689..41988)
DNA (300bp) protein (100aa)
PhnO-like protein id=12498028 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_263_44
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42038..42814)
DNA (777bp) protein (259aa)
hypothetical protein; K09773 hypothetical protein id=12498029 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein; K09773 hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_263_45
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42830..45172
DNA (2343bp) protein (781aa)
phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] id=12498030 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
phosphoenolpyruvate synthase (EC:2.7.9.2)
SCNpilot_BF_INOC_scaffold_263_46
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45414..45812
DNA (399bp) protein (133aa)
SirA family protein id=12498031 bin=THIO_MID species=Thioalkalivibrio thiocyanodenitrificans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
SirA family protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_BF_INOC_scaffold_263_47
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45862..47313
DNA (1452bp) protein (484aa)
hypothetical protein; K07112 id=12498032 bin=THIO_MID species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_BF_INOC_scaffold_263_48
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47368..47619
DNA (252bp) protein (84aa)
SirA family protein id=12498033 bin=THIO_MID species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
SirA family protein
SirA family protein {ECO:0000313|EMBL:ACL71168.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibr
SCNpilot_BF_INOC_scaffold_263_49
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47621..47932
DNA (312bp) protein (104aa)
hypothetical protein id=12498034 bin=THIO_MID species=Thioalkalivibrio thiocyanodenitrificans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_BF_INOC_scaffold_263_50
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47943..48203
DNA (261bp) protein (87aa)
hypothetical protein id=12498035 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_BF_INOC_scaffold_263_51
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48200..48403
DNA (204bp) protein (68aa)
id=12498036 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12498036 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_263_52
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48499..49989
DNA (1491bp) protein (497aa)
rhodanese-related sulfurtransferase id=12498037 bin=THIO_MID species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
rhodanese-related sulfurtransferase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_BF_INOC_scaffold_263_53
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50062..51324
DNA (1263bp) protein (421aa)
hypothetical protein id=12498038 bin=THIO_MID species=Singularimonas variicoloris genus=Singularimonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_BF_INOC_scaffold_263_54
unknown

Not on your lists

51444..51728
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_263_55
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51725..52219
DNA (495bp) protein (165aa)
hypothetical protein id=12498039 bin=THIO_MID species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_BF_INOC_scaffold_263_56
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52219..53403
DNA (1185bp) protein (395aa)
phosphate-selective porin O and P id=12498040 bin=THIO_MID species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
phosphate-selective porin O and P
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_BF_INOC_scaffold_263_57
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53489..54952
DNA (1464bp) protein (488aa)
PAS/PAC sensor signal transduction histidine kinase id=12498041 bin=THIO_MID species=Thioalkalivibrio thiocyanodenitrificans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
PAS/PAC sensor signal transduction histidine kinase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_BF_INOC_scaffold_263_58
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54949..56370
DNA (1422bp) protein (474aa)
Fis family transcriptional regulator id=12498042 bin=THIO_MID species=Thioalkalivibrio thiocyanodenitrificans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Fis family transcriptional regulator
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_BF_INOC_scaffold_263_59
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56402..57181
DNA (780bp) protein (260aa)
hypothetical protein id=12498043 bin=THIO_MID species=Novosphingobium aromaticivorans genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO34640.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp.
SCNpilot_BF_INOC_scaffold_263_60
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57199..59199
DNA (2001bp) protein (667aa)
type II and III secretion system protein id=12498044 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
type II and III secretion system protein Tax=CG_Beta_01
type II and III secretion system protein
Displaying items 31-60 of 192 in total

View Taxonomy