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SCNpilot_BF_INOC_scaffold_16035_4

Organism: SCNpilot_BF_INOC_Thiobacillus_strain2_63_25

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(1317..2003)

Top 3 Functional Annotations

Value Algorithm Source
lipid A export ATP-binding/permease MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] id=12498662 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 229.0
  • Bit_score: 441
  • Evalue 4.90e-121
lipid A export ATP-binding/permease MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 228.0
  • Bit_score: 408
  • Evalue 6.50e-111
lipid A export ATP-binding/permease MsbA similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 226.0
  • Bit_score: 403
  • Evalue 4.20e-110

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Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ACCACACCGGCGCTGGCCGGCATCTCGCTCGACATCGCCCCTGGAGAGACGGTGGCGCTGGTCGGCGCGTCGGGCTCGGGCAAGACCACGCTGGCCAATCTGGTGCCGCGCTTCTATGACCCGGATGCCGGCTCGATCCAGCTCGACGGCATCGACGTCCGCGACATCCGCCTGCAGAACCTGCGCAGCCACATCGCCCTGGTGTCGCAGGACGTCGTGCTGTTCAACGACACGCTGGCGCACAACATCGCCTACGGCCACAAACGCGACGCCACGGCCGACGAGATCCGCACCGCCTGCGTCGCCGCGCATGCCTGGGACTTCATCCAGGCCATGCCCGACGGCCTCGACACGCTGATCGGCGAGAACGGCATGCGGCTGTCCGGCGGCCAGCGCCAACGCATCGCCATCGCACGCGCCATCCTGAAGAACGCACCGCTGCTGATCCTCGACGAGGCCACCTCGGCGCTGGACAACGAATCCGAACGCCACGTCCAGGCCGCGCTCGAAGCGCTGATGGAAAACCGCACCACGCTGGTCATCGCGCATCGCCTGTCCACCATCGAACGCGCCGACCGGATTGTCGTGCTGGAAGGCGGTCGCATCGTCGAAATCGGCAGCCATGCCGACCTGATCGCCCGACAGGGCCGTTACGCGCAGCTGCACGCGCTGCAGTTTTCCGCATGA
PROTEIN sequence
Length: 229
TTPALAGISLDIAPGETVALVGASGSGKTTLANLVPRFYDPDAGSIQLDGIDVRDIRLQNLRSHIALVSQDVVLFNDTLAHNIAYGHKRDATADEIRTACVAAHAWDFIQAMPDGLDTLIGENGMRLSGGQRQRIAIARAILKNAPLLILDEATSALDNESERHVQAALEALMENRTTLVIAHRLSTIERADRIVVLEGGRIVEIGSHADLIARQGRYAQLHALQFSA*