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SCNpilot_BF_INOC_scaffold_287_107

Organism: SCNpilot_BF_INOC_Thiobacillus_strain2_63_25

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 110531..110734

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, omega subunit; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] id=12497816 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 68.0
  • Bit_score: 131
  • Evalue 3.20e-28
DNA-directed RNA polymerase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; Short=RNAP omega subunit {ECO:0000255|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00366};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 67.0
  • Bit_score: 124
  • Evalue 4.20e-26
RNA polymerase, omega subunit similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 67.0
  • Bit_score: 124
  • Evalue 8.50e-27

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGCCCGCATCACCGTCGATGACTGTATCGAAAAGATTTCCAACCGCTTCGAGCTGACGCTCGCAGCGACCTATCGCGCCCGCCAGCTGGCTCAGGGCTCGCAGCCGATGGTCGAGTCCAAGGACAAGCCCATCGTGACCGCCCTGCGCGAAATCGCCGCCGGCAAGGTCGGCCGTGAAATCCTCAATCGGGGTCGCGCCTGA
PROTEIN sequence
Length: 68
MARITVDDCIEKISNRFELTLAATYRARQLAQGSQPMVESKDKPIVTALREIAAGKVGREILNRGRA*