ggKbase home page

SCNpilot_BF_INOC_scaffold_263_184

Organism: SCNpilot_BF_INOC_Thiobacillus_strain2_63_25

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(193045..195000)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein D; K02453 general secretion pathway protein D id=12498174 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 652.0
  • Bit_score: 1252
  • Evalue 0.0
Type II secretion system protein D {ECO:0000313|EMBL:AAZ97392.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobaci similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 651.0
  • Bit_score: 847
  • Evalue 1.60e-242
type II secretion system protein D similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 651.0
  • Bit_score: 846
  • Evalue 4.10e-243

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1956
TTGTTTCCCCACCGTTTCGCCCTGTTGTTCGCCGCCGGGATCGCCGCCCTGATCGCCGGCTGCGCCAGCCCCGGCCTCAAGGAAGGCCGCGCCCTCATCGACGCGGGCCAGCCGGAAGCCGGCATCGCACGCCTGCGCGCAGGCATTGCCGAGGAACCCGGCAATCTCGAATTGAAAAGCTACTATCACACCCAGCGCGAACGCCTGGCCGGCGAATGGCTCACCCGCGCACAGCAGGAAATCGACGCGGGCCGTTTCGACACGGCCGAGGCGATGTTGCTGCGGATTCAGGCGATTCATCCCGAAAGCCCTCGTGCGGCCGCGCTGCTGGCCGGCCTGGCCGACGCCCGCTCGAACGCGCGCGCGGCCGAGGCGGCCGGCCGCGACCTCGCCGCCGGCCGTCTGGAGCAGGCTGAACAGACCGTCCGCGAGGTGCTCGCACGCAGCCCGGATCATGCCGGCGCACAGGCCGTGCTGCGCGGAATCCAGACCGCCCGCACGGCGGACGAAATCGCGCCGCGCGCCCTGGATGCGGCCTACCGCAAGCCGATCACGCTGGAACTGCGCGATGCGCCACTGAAAAACGCCTTCGACATGATCTCGCGGCAGTCCGGCCTCAATTTCGTGTTCGACAAGGACGTGCGGCTCGACGGCAAGATCACGCTCTACGCACGCGGCACGCCGATCGCCGACGCCGTGGACATGATCCTGCTCACCGGCCAGCTCGCGAAAAAGGTGGTCAACGCCAGCACTCTGCTGATCTATCCCGACCAGCCGCAGAAACAGAAGCTCTACCAGGAGCTGATGGTGAAGAGCTTCTACCTCGGCAACGCCGACGCCAAATCGACCCTGGCGCTGCTGCGCAGCGTGGTGAAGACGCGCGACATCTACGTCGACGAACGCCTGAACCTGCTGGTGATGCGCGACACGCCCGAGGCGATCCGCCTCGCGGAAAAAGTCGTCGCGGTACAGGATCTGGCCGATCCCGAGGTAATGCTCGACGTCGAGGTGCTCGAAATCAAGCGCGGCCGTCTGCTCGACCTGGGCGTGCAGTATCCCAACCAGTTCTCGATGCTCAACACCCTGACGACCGACACCGCCTCGACCACCGGCGGCGTCATCGTCAACACCACCACGACCACGCTGTCGCCGCTGCCGCTCACGGTGGACAAGCTGCGCGACATCGCCGGCCGGGACATCGCGATGAACGGCCCGCAGGTCAACGTCAAAAAAGAGGACAGCGACGTCAACCTCCTCGCCAACCCCCGCATCCGCGTGAAGAACCGCGAAAAGGCCAAGATCCACATCGGCGACAAGGTGCCGGTGATCACCTCGAACGCCACCGCCACCGGCGTTGTCTCGGAATCCGTCTCCTATCTCGACGTCGGCCTCAAGCTCGACGTCGAACCCAACGTGCTGATGCGCGACGACGTGCAGATCAGGGTCGGGCTGGAGGTTTCCAACATCGTGCGCGAAATCCGCAGCAACAGCGGCACCCTCACTTACCAGATCGGCACCCGCAACGCCGGCACCACACTGCGCCTCAAGGACGGCGAGACCCAGGTGCTCGCCGGACTGATCTCGGACGAAGACCGCAGCGCAGCCAGTCGCGTACCCGGCCTCGGCGACCTGCCGCTGATCGGCCGCCTGTTCTCCAGCCAGCGCGACGAGCGCAACAAGACCGAGATCGTGCTGCTGATCACGCCGCGCGTGCTGCGCGGCATCCAGACCGACCGGCCCGCGCTGACCGAATTCCGCAGCGGCACAGACAATGCCGTCGGCGGCGGCATGAGCCTGCCGATGACGACCGCGCTGCCGAACGTGCCGGATCAATCCGGACCGCAATCGCCGGAACCCGCGCTCCAGCCGCCTCCGGGCCTGCCGCCGCCCGGTTTGCCGATTCCAACCCCGCTGCTGCCGCCGCCGCCCGGCCAGCCCATCGTCCCGACGGAATGA
PROTEIN sequence
Length: 652
LFPHRFALLFAAGIAALIAGCASPGLKEGRALIDAGQPEAGIARLRAGIAEEPGNLELKSYYHTQRERLAGEWLTRAQQEIDAGRFDTAEAMLLRIQAIHPESPRAAALLAGLADARSNARAAEAAGRDLAAGRLEQAEQTVREVLARSPDHAGAQAVLRGIQTARTADEIAPRALDAAYRKPITLELRDAPLKNAFDMISRQSGLNFVFDKDVRLDGKITLYARGTPIADAVDMILLTGQLAKKVVNASTLLIYPDQPQKQKLYQELMVKSFYLGNADAKSTLALLRSVVKTRDIYVDERLNLLVMRDTPEAIRLAEKVVAVQDLADPEVMLDVEVLEIKRGRLLDLGVQYPNQFSMLNTLTTDTASTTGGVIVNTTTTTLSPLPLTVDKLRDIAGRDIAMNGPQVNVKKEDSDVNLLANPRIRVKNREKAKIHIGDKVPVITSNATATGVVSESVSYLDVGLKLDVEPNVLMRDDVQIRVGLEVSNIVREIRSNSGTLTYQIGTRNAGTTLRLKDGETQVLAGLISDEDRSAASRVPGLGDLPLIGRLFSSQRDERNKTEIVLLITPRVLRGIQTDRPALTEFRSGTDNAVGGGMSLPMTTALPNVPDQSGPQSPEPALQPPPGLPPPGLPIPTPLLPPPPGQPIVPTE*