ggKbase home page

SCNpilot_BF_INOC_scaffold_36_238

Organism: SCNpilot_BF_INOC_Flavobacteriales_40_20

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(262180..262869)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBK6_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 226.0
  • Bit_score: 337
  • Evalue 1.30e-89
winged helix family two component transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 227.0
  • Bit_score: 353
  • Evalue 1.90e-94
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 226.0
  • Bit_score: 337
  • Evalue 3.70e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Fluviicola_43_260 → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 690
ATGAAAGCGAAAATTTTATTAGCCGAAGATGACACAAGCCTAGGTTTTGTGATTGCAGATCAGCTACGGTCTGAAGGATATCACGTAACGCTGTGCTCTAACGGTGTTGAAGCTTATCAACGATTCAACGAAGACAAATACAACATCTGTATATTTGACGTAATGATGCCAAAAAAAGATGGTTTTTCATTAGCTGAAGACATTCGTAAACTCGATACGGAAATTCCGATTATTTTCCTGACTGCCAAATCAATGACAGAAGATAAAATCAAAGGATTCGAAGCAGGAGGAGATGATTATCTTACGAAACCATTCAACTTTGATGAGTTGCACATGCGGATCAAAGCATTGTTGAAACGGGTAAACATCATCATCGGTGAAGCAGAAGAGAAAGTAATCAAATTAGCAAGCTATACCTTCGACACGGAGAACTATAAGCTGATCCACCCTACTTTCGAGAAAACCCTGACAAAGAAAGAAGCGCAGATTTTAAAAATGCTTTGCAAGTTCAAAAATCAGGTAGTTCCGAGAGAAGTCGTATTAAATGCCGTCTGGGGACAGGATGACTACTTCGTAGGAAGAAGCCTGGATGTGTTTATCACGAAGTTAAGAAAGTATCTTAAAGAAGACGATAACGTTCAGATCAATAACATTCACGGAATCGGTTTTAAATTAGAAGTGAAAGAATAA
PROTEIN sequence
Length: 230
MKAKILLAEDDTSLGFVIADQLRSEGYHVTLCSNGVEAYQRFNEDKYNICIFDVMMPKKDGFSLAEDIRKLDTEIPIIFLTAKSMTEDKIKGFEAGGDDYLTKPFNFDELHMRIKALLKRVNIIIGEAEEKVIKLASYTFDTENYKLIHPTFEKTLTKKEAQILKMLCKFKNQVVPREVVLNAVWGQDDYFVGRSLDVFITKLRKYLKEDDNVQINNIHGIGFKLEVKE*