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SCNpilot_BF_INOC_scaffold_148_2

Organism: SCNpilot_BF_INOC_Bacteroidetes_37_82

near complete RP 52 / 55 BSCG 49 / 51 ASCG 14 / 38
Location: comp(296..1153)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KTJ4_HALH1 similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 288.0
  • Bit_score: 311
  • Evalue 7.40e-82
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KGE85178.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phae similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 289.0
  • Bit_score: 314
  • Evalue 1.20e-82
RNA polymerase sigma factor rpoD similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 287.0
  • Bit_score: 312
  • Evalue 1.20e-82

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Taxonomy

Phaeodactylibacter xiamenensis → Phaeodactylibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 858
ATGAAAGCACTAAAACTTACTAACCAAATTACCCAGCGCGATAGTGAGTGCGTAGAAAAGTATTTGTCAGAAATTGGCAAAAGCGATATTCTCACGCCTCAACAAGAAGCAGATTTAGCCCAGCGAATTAAAGAAGACGATTTAGACGCATTAGAAACCTTAGTAAATTCCAACCTTAGGTTTGTGGTAAGCGTTGCGAAACAATATCAAAATCAAGGATTGCCGCTAAGCGATTTAATAAATGAGGGCAACTTAGGCTTAATTCGGGCAGCCAAAAAATTTGACGAAACCAAAGGTTTTAAATTTATATCGTATGCCGTTTGGTGGATTAGGCAAGCAATAATGCAAGCTATAATTGAGCAATCGCGCATCATTCGAGTTCCGATAAATAAAGTGGGAACATTCACAAAAATCAATCGTGCTTTTCAGTCGTTTGAGCAGCAATACCAACGCGAACCAAGCATTGATGAACTTGCTGAACATGTTGGCATGAGCAAAGATGATGTGAATGATTATTTTAATAATAACATGCCTACGGTTTCTACAGATTCTAGATTTTCCGAGGGATCCAGTTTGGCGGAAACACTTTCTAACAGCGAAGATATGACTCCCGAACAGAGTTATATTAAGAAAAGCGCTGAGGCAGAATTGTTTTCACTTTTTGCACACTTAAACGAGCGCGAAGTGGAAGTGCTTACCAATTATTTCGGGCTGAATGGAAAAGAGCCAAAAACATTGGAGGAAATTGGTCAGCAATATGGCTTAACCCGCGAAAGGGTACGCCAAATTAAAGAGCGCTCCATGCAAAAACTTAAACAACATACTAATCCAAATTTATTGGACTCCCTTTTGGGGTAA
PROTEIN sequence
Length: 286
MKALKLTNQITQRDSECVEKYLSEIGKSDILTPQQEADLAQRIKEDDLDALETLVNSNLRFVVSVAKQYQNQGLPLSDLINEGNLGLIRAAKKFDETKGFKFISYAVWWIRQAIMQAIIEQSRIIRVPINKVGTFTKINRAFQSFEQQYQREPSIDELAEHVGMSKDDVNDYFNNNMPTVSTDSRFSEGSSLAETLSNSEDMTPEQSYIKKSAEAELFSLFAHLNEREVEVLTNYFGLNGKEPKTLEEIGQQYGLTRERVRQIKERSMQKLKQHTNPNLLDSLLG*