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SCNpilot_BF_INOC_scaffold_148_23

Organism: SCNpilot_BF_INOC_Bacteroidetes_37_82

near complete RP 52 / 55 BSCG 49 / 51 ASCG 14 / 38
Location: comp(28242..32060)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 999.99
  • Bit_score: 1990
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG6_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 999.99
  • Bit_score: 1988
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 999.99
  • Bit_score: 1988
  • Evalue 0.0

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Taxonomy

Phaeodactylibacter xiamenensis → Phaeodactylibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3819
ATGGCTGAAAAGAGCAACCAAGAAATCCAGAAAAGAATTAGCTTTGGAAAAGTAAGAGTTCTGGATGAGCAACCAAACCTATTAGATATTCAACTTGCCTCGTTTCGCGAATTTGTTCAATTAGAAACTACTGCCGACAACCGCTCTAAAGAGGGACTTTGGACAGTTTTTTCTGAAAACTTTCCAATAACAGATTCCAGAGGTATATTTTTGCTAGAGTTTTTGGACTACTTTGTAGATCCACCACGCTACAGCATTGATGAATGTATTGAACGCGGATTAACTTACTGCGTTCCATTAAAAGCGAAATTAAGACTAAGCTGTAATGATCCTGAACACATAGATTTTAAAACTATTGTTCAAGACGTTTTCTTAGGAAACATACCATACATCACACCAAAAGGTACTTTTATTATTAACGGTGCCGAGCGCGTAGTTGTGAGCCAACTTCACCGCTCTCCTGGTGTATTTTTCGGTCAAAGCCTTCACCCGAATGGAACTAAGATTTATTCTGCAAGGGTTATTCCTTTTAAAGGAGCATGGATGGAATTTGCAACCGATATCAATAACGTAATGTATGCTTACATTGACCGTAAGAAGAAATTTCCGGTTACAATGTTGTTAAGAGCTGTAGGTTACGATACGGATAAAGATATTCTTAAACTCTTCGATTTGGCTGATGAAATCGAATTGAAAACTAAGAAAGATGCAAGCAAAGCAATTGGTAGAAAATTAGCTGCGCGTGTTCTTAAAACTTGGATGGAAGACTTCGTTGATGAAGATACCGGTGAGGTAGTTTCTATCGAACGTAATGAAGTTTTGTTGGAGCGTGATACCATAATTACCGATGACAATATTGAGTTAATTGTAGATAGCGGAGCCAAAACTTTGTTTGTACATAAAGAATCGGTAGAGGCTGATTACTCAATCATTTTCAATACGTTACAGAAGGATACTTCAAACTCTGAAGTAGAAGCTTTGAGTCATATTTATCGCCAGTTGCGTGGTTCAGATCCACCAGACGAAGAAACTGCTCGTGGTATTATTGAGAAGTTATTCTTTAGCGATAAGCGTTACGATTTAGGTGAAGTAGGTAGATACAAAGTGAACAAAAAGTTAGAACACGACACCGCAATGGATGTTCGCGTTTTAACAAAACAAGATATTATCTCGATTGTTAAATATTTGGTGAACTTATCTAACCAAAAAGCGGAAATTGACGATATTGACCATTTGAGCAACAGAAGAGTGCGCACAGTGGGCGAGCAGTTATATTCTCAATTTGGAGTAGGTTTAGCCAGAATGGCAAGAACTATCCGTGAACGTATGAACGTGCGTGATAATGAAGTGTTTACGCCAATTGACTTGATTAATGCAAGAACACTTTCTTCAGTAATCAACTCATTCTTTGGTACTTCACAACTTTCGCAGTTCTTAGACCAAACCAACCCGTTGGCAGAAATTACCAACAAGCGTAGAGTTTCGGCTTTAGGTCCCGGTGGTTTAAGTCGTGAGCGTGCAGGTTTTGAAGTAAGAGACGTACACTACAGCCACTACGGTCGCTTGTGTACTATCGAAACTCCGGAAGGTCCAAACATTGGTTTGATTTCAACTTTGTGTACACATGCAAAGGTGAATGCAATGGGCTTTATTGAAACACCATATCGCAAAGTAACAAATGGCAAAGTAGATATGAACGGTGCAGTTCAATTCCTTTCTGCTGAAGAAGAAGATAACTACACCATTGCTCAAGCAAAAACAGATATTGAAAAGAACGGAACAATAAGCACTGATAAAGTAAAAGCTCGTTTCCAAGGTGATTTTCCTATCACTACACCGGAAGAAGTACAGTTTATTGATGTTGCACCAAACCAAATTGTGGGTGTAAGCGCATCGTTAATTCCTTTCTTGGAGCATAATGACGCTAACCGTGCATTGATGGGTTCAAACATGCAACGTCAAGCGGTGCCATTATTGCGCCCTCAAGCGCCAATTGTTGGTACAGGATTAGAAGCTAAAGTAGCACACGATTCTAATAACTTGGTGAATGCAGAAGGAAACGGTGTGGTAGAATATGTTGATGCAAATCAAATTATTATTCGCTACGACCGCACTCAAGAAGAGCAATTAGTTAGCTTTAAAGACGATAAGAAAACCTATAACCTTTCTAAATTCTTAAAAACTAACCAAAGTACTTGTATCAACTTAAAGCCGTTAGTTCGAAAAGGACAACGTGTGGTAGCAGGGCAAGTATTGTGCGAAGGTTTTGCAACAGAAAAAGGAGAGTTGGCATTAGGTTCAAACCTTAAAGTGGCGTTCATGCCGTGGAAAGGTTACAACTTTGAAGATGCGATTGTAATTTCAGAAAGAGTTGTGCGCGATGATGTATTCACTTCAATTCACGTTGAAGAATTTGAGTTAGAAATTCGCGATACTAAATTAGGAGAAGAAGAACTTACACCGGATATACCAAACGTGGCAGAAGAAGCTACTAAAGACTTAGATGATAATGGAATTATCCGCGTTGGAGCGCACGTGAAAGAAGGCGATATTTTAATTGGTAAAATTACACCTAAAGGCGAAAGCGACCCAACTCCGGAAGAAAAACTATTAAGAGCAATCTTTGGTGATAAAGCAGGTGATGTAAAAGATGCTTCATTGAAAGTACCACCTTCAGTAGAAGGAACTGTTATCAATAAAAAACTTTTTGCTCGCGCTAAAAAGGACAAAACATCTAAAACTCGCGAAAAAACTTTATTAGAGAAATTAGATAAAGATTTTGGTAAGAAAACTGCTGAGATTAAAGATGTTTTAATTGAAAAGTTGATGACCGTTTTAAGCGGGAAAGTGAGCAACGGAGTTTACAATTCTTTCAAAGAAGAAGTTGTTTCTAAAGGAACAAAATTCACTTCTAAAGTTTTGGAATCTCTTGATTACACAAACATTGATGCTTTAAAGTGGACGAAAGAAGACGACACTAACCATTTAGTGAAGTTGATTATTCACAATTACACACTTCGCATAAATGAAGAAACCGGTCGCTATAAGAGAGAGAAATTCAATATTAGCATTGGTGATGAACTACCAAGCGGAGTATTGAAATTAGCCAAAGTTTACCTTGCTAAGAAACGTAAGTTGAAAGTAGGAGATAAAATGGCAGGTCGCCACGGAAACAAAGGTATTGTTGCCCGTATTGTTCGCCAAGAAGACATGCCTTTCTTAGAAGATGGAACTCCGGTTGATATTGTTTTGAACCCACTGGGCGTACCTTCGCGTATGAACCTTGGTCAAATTTATGAAACCGTATTGGGTTGGGCTGGCTTAAAATTAGGTTTAAAATTCGGAACGCCAATTTTTGATGGTGCTTCATTAGAAGAAGTTTCTGAGTACATTAAAAAAGCTGATTTACCTGAATATGGTTCTACTTACCTTTACGATGGTGAGACCGGAGAGCGTTTTGACCAAAGAACAACTGTGGGTGTAATCTACATGATTAAGCTTATACACATGGTTGATGATAAAATGCACGCACGTTCTACAGGTCCTTACTCACTCATCACACAACAACCATTGGGCGGTAAAGCGCAATTTGGCGGCCAGCGTTTTGGTGAAATGGAAGTTTGGGCACTTGAAGCTTATGGTGCATCAAATATTTTGCAAGAATTACTTACTGTGAAGTCTGATGATATTGTTGGTAGAGCAAAAGCTTATGAAGCTATTGTGAAAGGCGACAATATCCCTGAGCCAAACATGCCGGAATCTTTCAATGTATTGGTTCATGAATTGCGTGGTTTAGCATTAGATTTAAAATTCGATTAA
PROTEIN sequence
Length: 1273
MAEKSNQEIQKRISFGKVRVLDEQPNLLDIQLASFREFVQLETTADNRSKEGLWTVFSENFPITDSRGIFLLEFLDYFVDPPRYSIDECIERGLTYCVPLKAKLRLSCNDPEHIDFKTIVQDVFLGNIPYITPKGTFIINGAERVVVSQLHRSPGVFFGQSLHPNGTKIYSARVIPFKGAWMEFATDINNVMYAYIDRKKKFPVTMLLRAVGYDTDKDILKLFDLADEIELKTKKDASKAIGRKLAARVLKTWMEDFVDEDTGEVVSIERNEVLLERDTIITDDNIELIVDSGAKTLFVHKESVEADYSIIFNTLQKDTSNSEVEALSHIYRQLRGSDPPDEETARGIIEKLFFSDKRYDLGEVGRYKVNKKLEHDTAMDVRVLTKQDIISIVKYLVNLSNQKAEIDDIDHLSNRRVRTVGEQLYSQFGVGLARMARTIRERMNVRDNEVFTPIDLINARTLSSVINSFFGTSQLSQFLDQTNPLAEITNKRRVSALGPGGLSRERAGFEVRDVHYSHYGRLCTIETPEGPNIGLISTLCTHAKVNAMGFIETPYRKVTNGKVDMNGAVQFLSAEEEDNYTIAQAKTDIEKNGTISTDKVKARFQGDFPITTPEEVQFIDVAPNQIVGVSASLIPFLEHNDANRALMGSNMQRQAVPLLRPQAPIVGTGLEAKVAHDSNNLVNAEGNGVVEYVDANQIIIRYDRTQEEQLVSFKDDKKTYNLSKFLKTNQSTCINLKPLVRKGQRVVAGQVLCEGFATEKGELALGSNLKVAFMPWKGYNFEDAIVISERVVRDDVFTSIHVEEFELEIRDTKLGEEELTPDIPNVAEEATKDLDDNGIIRVGAHVKEGDILIGKITPKGESDPTPEEKLLRAIFGDKAGDVKDASLKVPPSVEGTVINKKLFARAKKDKTSKTREKTLLEKLDKDFGKKTAEIKDVLIEKLMTVLSGKVSNGVYNSFKEEVVSKGTKFTSKVLESLDYTNIDALKWTKEDDTNHLVKLIIHNYTLRINEETGRYKREKFNISIGDELPSGVLKLAKVYLAKKRKLKVGDKMAGRHGNKGIVARIVRQEDMPFLEDGTPVDIVLNPLGVPSRMNLGQIYETVLGWAGLKLGLKFGTPIFDGASLEEVSEYIKKADLPEYGSTYLYDGETGERFDQRTTVGVIYMIKLIHMVDDKMHARSTGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGASNILQELLTVKSDDIVGRAKAYEAIVKGDNIPEPNMPESFNVLVHELRGLALDLKFD*