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SCNpilot_BF_INOC_scaffold_148_128

Organism: SCNpilot_BF_INOC_Bacteroidetes_37_82

near complete RP 52 / 55 BSCG 49 / 51 ASCG 14 / 38
Location: comp(138339..138680)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase, omega subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC9_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 107.0
  • Bit_score: 119
  • Evalue 1.60e-24
DNA-directed RNA polymerase subunit omega Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 109.0
  • Bit_score: 121
  • Evalue 7.80e-25
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 107.0
  • Bit_score: 119
  • Evalue 4.60e-25

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Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 342
ATGGATAAGAGTAAAAAAGTAAAGCTATCGCAGCTAAATCCTTACATCGAAACACAAAGTTTGGCAGCTATTGCAGGTAAAACAGGCAATTTATACGAGTCTTTGTATATTATTTCTCGTAGAGCAAACCAAATTGGAAAAGAATTAAAAGAAGAACTTCATTCTAAATTAAAAGATTTTGAATCGAACGATTCTTTAGAGGAAATAAACGAAAACCGTGAGCAAATTGAAATTTCACGTTTTTATGAGCGTTTGCCGCATGCAACACTTATTGCTACCAACGAATTTATGGATGGCAACGTTTATTACCGCGAAAATTTCGAAGGTAACGAAGCAAAATAA
PROTEIN sequence
Length: 114
MDKSKKVKLSQLNPYIETQSLAAIAGKTGNLYESLYIISRRANQIGKELKEELHSKLKDFESNDSLEEINENREQIEISRFYERLPHATLIATNEFMDGNVYYRENFEGNEAK*