ggKbase home page

SCNpilot_BF_INOC_scaffold_344_2

Organism: SCNpilot_BF_INOC_Bacteroidetes_43_41

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(873..1466)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UKH8_TANFA similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 197.0
  • Bit_score: 292
  • Evalue 2.40e-76
Sigma-70 region 2 similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 197.0
  • Bit_score: 292
  • Evalue 6.90e-77
Sigma-70 region 2 {ECO:0000313|EMBL:BAR47952.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 197.0
  • Bit_score: 292
  • Evalue 3.40e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tannerella forsythia → Tannerella → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 594
ATGGAAGTTCTTTTGTCGATGTCCGACGAGGAGTTGGTCGTTTTGTATGCCGAAGGCAATAATTGCGCATTTGAAGTTCTTCTCTCCCGGCACAAACAATCTCTTTTCAGTTACATTTTGTATATGGTCCGCAATCGCGACCTGGCTGACGATATTTTCCAGGATACGTTCATCAAAGCTATTTTCACAATAAAGCAAGGCAGATATACCGAGAGCGGTAAATTCCGTGCCTGGATCACGCGCATTGCACACAATTTAATGGTCGATTATTTTCGCCAGGAGCGGAACGAAAACACGGTTTCGAACGATGAATACGAGTTTGACCTGTTGAATAACTCCGGGCTTTGTGAGGATAATATTGAGGCGACTATGGTGAAAGCCCAGGTGTTTGACGATGTGAAAAAACTGGTTGAATGCTTGCCCGAATCGCAACGCGAAGTGTTGAATATGCGTTATTATCAGGAACTGAGTTTTAAGGAGATTGCCGATAAAACCGGTGTGAGCATCAATACCGCTTTAGGCAGGATGCGGTACGCTATTTTGAATATGCGCAAAATGGCAGACGACAACCGAATGATGTTATCGATGAGTTAA
PROTEIN sequence
Length: 198
MEVLLSMSDEELVVLYAEGNNCAFEVLLSRHKQSLFSYILYMVRNRDLADDIFQDTFIKAIFTIKQGRYTESGKFRAWITRIAHNLMVDYFRQERNENTVSNDEYEFDLLNNSGLCEDNIEATMVKAQVFDDVKKLVECLPESQREVLNMRYYQELSFKEIADKTGVSINTALGRMRYAILNMRKMADDNRMMLSMS*