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SCNpilot_BF_INOC_scaffold_616_26

Organism: SCNpilot_BF_INOC_Bacteroidetes_43_41

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(18719..19249)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor id=3504037 bin=GWC2_Bacteroidetes_46_850 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 175.0
  • Bit_score: 259
  • Evalue 2.70e-66
rpoE; protein RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Bacteroidetes_46_850_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 175.0
  • Bit_score: 259
  • Evalue 3.80e-66
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 184.0
  • Bit_score: 144
  • Evalue 3.50e-32

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Taxonomy

GWC2_Bacteroidetes_46_850_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 531
ATGTCGGACGAACAACTCATATACAAAATAAATTCGAGCGATCCCTCTGCCTTTAAAATGCTGATGGAAAAATACCAATTGCAGGTGTTTCGAACCGTTATGGGATTTGTTCACTCGAAAGAAGATGCTGAGGATATCACGCAGGATATTTTTGTGAAGGTGTATCAGTCGCTCGCATCTTTCAAAGGAGAATCGGAGTTTTCCACATGGCTTTACAGAATCACCGTGAACATGAGCATAAATTTCGTCAATCGAAATCGTAAAAACCGGTTGCTCCAATCCCTCGAAGATATTTTCACCAAACCGGGCAACGAGAAAACACCGCTGGAACAACTGGAAGAGTCGGAACGTGATCGGCGTATTCAAAAAGCTATCGATTCATTGACCGAAAGACAACGAATGGCTTTTATTTTAAGTAAATACGAAGAACTTTCTCAAAAAACGATCGCTTCGGTGATGAATACATCGGAAGGCGCTGTGGAACAACTGTTACAAAGAGCAAAAAACAATTTACAAAGAAAATTAAGCTGA
PROTEIN sequence
Length: 177
MSDEQLIYKINSSDPSAFKMLMEKYQLQVFRTVMGFVHSKEDAEDITQDIFVKVYQSLASFKGESEFSTWLYRITVNMSINFVNRNRKNRLLQSLEDIFTKPGNEKTPLEQLEESERDRRIQKAIDSLTERQRMAFILSKYEELSQKTIASVMNTSEGAVEQLLQRAKNNLQRKLS*