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SCNpilot_BF_INOC_scaffold_203_54

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: comp(59677..60267)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZW2_FLAB3 similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 196.0
  • Bit_score: 329
  • Evalue 3.10e-87
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KEY18248.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseoba similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 196.0
  • Bit_score: 340
  • Evalue 1.90e-90
RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 196.0
  • Bit_score: 329
  • Evalue 8.60e-88
  • rbh

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Taxonomy

Chryseobacterium antarcticum → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 591
ATGACGACAAAAACAGATAGTTGGCTGATTTCCCAATTCAAAAACGGCGACGAAAAAGCACTTGCTGTCCTCATTGAGCGACACCAAAAAGACCTGTTCTCCTTTATCTTTTATAAAATTATGGACGAGAGTCTGGCCAATGATATTTTTCAGGATACTTTTATGAAAATTATTGTAACGCTGAAGGAAGGGCGCTACAATGAGGAAGGAAAATTCATCCTCTGGGCAAAAAGAATTGCGCACAACCTTATTATCGATCATTATCGGTTGGTATCCAAACACAACAAAATATCGGAATCTAGCTATGATAATGAAGAGTTTTCAATCTTTGATTTGCTTGCCAATCAGGAAGAAAATATAGAAGAACAACTGATCAGTATCCAGATCAAAGATGACTTGATGAAAATTTTGGAATACCTTCCGGAGAATCAGCGGGAAGTCATCAAACTTCGTTTTTTTGATGGGCTTAGTTTTAAGGATATTGCTGAGCAAACAGAAACCAGCATCAACACAACTCTGGGGCGGGTACGCTATGCACTTATCAACTTGCGAAAAATGATGAGCGACCATAATATTATTTTAACACGCTAA
PROTEIN sequence
Length: 197
MTTKTDSWLISQFKNGDEKALAVLIERHQKDLFSFIFYKIMDESLANDIFQDTFMKIIVTLKEGRYNEEGKFILWAKRIAHNLIIDHYRLVSKHNKISESSYDNEEFSIFDLLANQEENIEEQLISIQIKDDLMKILEYLPENQREVIKLRFFDGLSFKDIAEQTETSINTTLGRVRYALINLRKMMSDHNIILTR*