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SCNpilot_BF_INOC_scaffold_221_38

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 45481..46068

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035EEC09 similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 199.0
  • Bit_score: 252
  • Evalue 3.60e-64
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KGM53334.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 181.0
  • Bit_score: 281
  • Evalue 7.80e-73
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 195.0
  • Bit_score: 237
  • Evalue 3.40e-60

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Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
GTGAATGACAGCCCGACCAGCCATGCCGAGGACCAGGCCCTCGTCAATGCCGTCCTGAACGGATCGCCGGGCGCGTTCGAGCGCCTCGTGCGCGACTACCAGAAGCTCTGCTGGCACGTGATCCAGCGCATGGTCGGGCACGTCGAGGACACCCGCGAGCTGTGCCAGGAGACCTTCCTTCGCGTGCATCAATACCTGCATCAGTATCGCAACGAGAGTGCCTTGAAATCGTGGATTGCCCAGGTTGCCTATTCGGTGGCCAAGCGCCATCTCGAACGCAAGCGCATTCCGCTGGCCGAACCCGACGCGGATGCGGACGGGCTCTCGCCGCTCGATCGTGTCAGCGATGATTTCGACATCGAGACAGCCAGCATCGACAACCAGATGGCCGGTCATCTGCACGCGGCCATCGAGTGCCTGCCGCCGCTGCAGCGAACGATCCTCACCCTTTACCATCTCGACGAGCTGCCGATCGGCGATATTGCGCAGGTCACCGGCCTCGCCGAGGGCACCATCAAGAGCCACCTTTTCCGCAGTCGCAAGCAGTTGCGGGATGCGTTGAACGAGCACATGGGAGTCGCCGCATGA
PROTEIN sequence
Length: 196
VNDSPTSHAEDQALVNAVLNGSPGAFERLVRDYQKLCWHVIQRMVGHVEDTRELCQETFLRVHQYLHQYRNESALKSWIAQVAYSVAKRHLERKRIPLAEPDADADGLSPLDRVSDDFDIETASIDNQMAGHLHAAIECLPPLQRTILTLYHLDELPIGDIAQVTGLAEGTIKSHLFRSRKQLRDALNEHMGVAA*