ggKbase home page

SCNpilot_BF_INOC_scaffold_13167_1

Organism: SCNpilot_BF_INOC_Pseudomonadales_partialdouble_39_4

near complete RP 49 / 55 MC: 9 BSCG 43 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 3..422

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Acinetobacter sp. ANC 3862 RepID=N9LRZ4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 133.0
  • Bit_score: 234
  • Evalue 5.60e-59
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1217705 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetoba similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 133.0
  • Bit_score: 234
  • Evalue 7.80e-59
DNA-directed RNA polymerase specialized sigma subunit, sigma54-like protein similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 133.0
  • Bit_score: 197
  • Evalue 2.10e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acinetobacter sp. ANC 3862 → Acinetobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
CTGGAAAAAATTGAAGAAAATAATAATACAACAGAAAGTTTATCTACTTCAGAGATCAGTGAGTCAGGAGATTTAACAACTGAACTTAATGCAGACCATTTACCAAATGACTTGCCTGTTGATACCGAATGGGATGATATTTATACCCATCAATCGACGGCATTGGGCTCACCAGAATATGAAGAAAGAGAAGACAATCGCCAGATACAATTGAGCCTAAAAGAGCATATTTTAGATCAAGTGAATCTTTTGCATTTTTCGACTGTAGATAAACTGATTGCATATTGCATTGTTGACTCTTTGGACGATAAAGGATTCCTCGATGCAACGTTAGAAGATATCTTGCTTGCTGTCTCAGGCTTATTGCATGAATGGAAAGTGAGGAAGAAGTTGAAGAAGATGAAATCGTTGTGGTTTTAA
PROTEIN sequence
Length: 140
LEKIEENNNTTESLSTSEISESGDLTTELNADHLPNDLPVDTEWDDIYTHQSTALGSPEYEEREDNRQIQLSLKEHILDQVNLLHFSTVDKLIAYCIVDSLDDKGFLDATLEDILLAVSGLLHEWKVRKKLKKMKSLWF*