ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_BF_INOC_scaffold_43718_1

Organism: SCNpilot_BF_INOC_Pseudomonadales_partialdouble_39_4

near complete RP 49 / 55 MC: 9 BSCG 43 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 3..674

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) s similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 223.0
  • Bit_score: 431
  • Evalue 7.00e-118
tRNA pseudouridine synthase B n=1 Tax=Acinetobacter sp. NIPH 1847 RepID=N9MKD0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 223.0
  • Bit_score: 431
  • Evalue 5.00e-118
truB; tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 223.0
  • Bit_score: 376
  • Evalue 7.00e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acinetobacter sp. NIPH 1847 → Acinetobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
CAAGCCACGGTCAAGTTAGGGCAAACCACGGCGACCGGTGATGTTGAAGGTGAAATTCTCCAGCAGAGAGAAGTACCAACTTTAACGGCTGAAGGTATTGAACAGGTGTTGGCGCAATTCAGAGGCGATATTCAGCAAGTGCCACCGATGTATTCAGCATTGAAGCGTGAAGGTCGTCCACTCTATGAATTAGCACGTAAAGGGATCGAAATTGAGCGTGAAGCGCGCCCAGTCACCATCTATGAATTAACACTGATTAGTTTTACTGAAGATAGCTTAACGTTGGATGTGACTTGTTCCAAGGGGACTTATATTCGTGTCTTAGGTGAAGATATTGGTGAGGCTTTGGGCTGTGGTGGACATTTAACCCAATTGCATCGTACCCAAACAGGGCACTTTGATATTAATCCAAGTTTTACCATTGAATATCTCGAAAGCCTTACCCAAGAACAACGCGATGCCTTATTGCTGCCAGTCTATGCACCTGTTGAGCATTTTCCTCGGGTGCAATTGCCTGAAGGCCGTGAAAAGTATTTTGGTAACGGGCAGGAAAGCAATATCGATCATGACGCTGCTGCTGAAGTGTTGGTTTTTGATGGTGAACGTTGCCTAGGTTTGGCTGAAATCACCGATAAAAAACGTCTAGTACCAAAACGCTTGTTAAATTTATAA
PROTEIN sequence
Length: 224
QATVKLGQTTATGDVEGEILQQREVPTLTAEGIEQVLAQFRGDIQQVPPMYSALKREGRPLYELARKGIEIEREARPVTIYELTLISFTEDSLTLDVTCSKGTYIRVLGEDIGEALGCGGHLTQLHRTQTGHFDINPSFTIEYLESLTQEQRDALLLPVYAPVEHFPRVQLPEGREKYFGNGQESNIDHDAAAEVLVFDGERCLGLAEITDKKRLVPKRLLNL*