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SCNpilot_BF_INOC_scaffold_4575_4

Organism: SCNpilot_BF_INOC_Pseudomonadales_partialdouble_39_4

near complete RP 49 / 55 MC: 9 BSCG 43 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(3301..4308)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 335.0
  • Bit_score: 648
  • Evalue 4.20e-183
DNA-directed RNA polymerase subunit alpha n=10 Tax=Acinetobacter RepID=G7GC52_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 335.0
  • Bit_score: 648
  • Evalue 3.00e-183
DNA-directed RNA polymerase, alpha subunit/40 kD subunit similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 335.0
  • Bit_score: 642
  • Evalue 6.00e-182

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Taxonomy

Acinetobacter sp. NBRC 100985 → Acinetobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGACGCGTACTGCAAACGAGTTTCTAACTCCGCAAGCGATCAAGGTCGAAGCGGTGAGCGGGACCTCGGCAAAAGTGATTCTTGAGCCTTTAGAGCGTGGTTTTGGCCATACTCTAGGTAATGCTTTACGTCGCATTCTATTGTCTTCTTTACCTGGCGCTGCTGTGGTTGAAGTTGAGATAGAAGGCGTCGAGCACGAGTACAGTACTTTAGAAGGCTTGCAGCAGGACATCGTCGAGCTCTTGCTGAACCTAAAAGGATTGTCTATTAAGCTGTTCGATCAAAATGAAGCATATTTGACATTAGAGAAACAAGGAGCGGGTGACGTAACTGCAGCTGACCTTCGTTTACCTCATAATGTTGAAGTGGTTAACCCTGATCATTTAATCGGTACTTTGAGTTCTACAGGTTCATTAAAAATGCGCCTGAAAGTTGCTCAAGGTCGTGGTTATGAAACATCTGACTCACGTTTCCCTGAAGGCGAAACACGTCCTGTAGGTCGTTTACAGTTAGATGCTTCTTATAGCCCAATCAAGCGTGTTTCATACACAGTAGAAAATGCTCGTGTTGAACAACGTACCGATCTTGATAAGTTAGTGATCGATCTTGAGACTAACGGAACTGTTGATCCAGAAGAAGCTATCCGCAAAGCGGCAACAATCTTGCAACAACAAATTGCAATTTTTGTTGATCTTCAGAAAGATCAAACTCCTGTCGCTCAAGAACCTCGCGAAGAAGTTGACCCAATTTTGCTTCGTCCAGTAGATGATCTCGAGCTTACTGTTCGTTCTGCTAACTGTTTGAAGGCAGAAAATATTTACTACATTGGTGATCTTGTTCAACGTACTGAAGTTGAGTTGTTAAAAACTCCTAACTTAGGTAAAAAATCGTTAACAGAGATCAAAGATGTTTTGGCATCGAAAGGTTTACAACTCGGCATGCGTTTAGAGAACTGGCCACCAGCTAGTCTCCGTATGGATGACCGATTCGCCTATCGTAGCCGTTAA
PROTEIN sequence
Length: 336
MTRTANEFLTPQAIKVEAVSGTSAKVILEPLERGFGHTLGNALRRILLSSLPGAAVVEVEIEGVEHEYSTLEGLQQDIVELLLNLKGLSIKLFDQNEAYLTLEKQGAGDVTAADLRLPHNVEVVNPDHLIGTLSSTGSLKMRLKVAQGRGYETSDSRFPEGETRPVGRLQLDASYSPIKRVSYTVENARVEQRTDLDKLVIDLETNGTVDPEEAIRKAATILQQQIAIFVDLQKDQTPVAQEPREEVDPILLRPVDDLELTVRSANCLKAENIYYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASKGLQLGMRLENWPPASLRMDDRFAYRSR*