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SCNpilot_BF_INOC_Pseudomonadales_partialdouble_39_4

SCNpilot_bf_inoc_Acinetobacter_39_4
In projects: SCNpilot_bf_inoc

Consensus taxonomy: Acinetobacter  →  Pseudomonadales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 1-50 of 1605 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_BF_INOC_scaffold_40864
Species: Acinetobacter sp. NIPH 809 (100%)
1 1000 bp 47.30 2.51 99.90
SCNpilot_BF_INOC_scaffold_40869
Species: CG_Flavo_02 (50%)
2 1000 bp 41.50 4.27 93.30
SCNpilot_BF_INOC_scaffold_40825
Species: Acinetobacter sp. NIPH 236 (66.67%)
3 1001 bp 33.97 4.01 80.32
SCNpilot_BF_INOC_scaffold_40780
Species: Acinetobacter sp. CIP 56.2 (100%)
1 1002 bp 45.31 5.01 95.21
SCNpilot_BF_INOC_scaffold_40675
Species: marine sediment metagenome (50%)
2 1005 bp 49.05 2.75 67.16
SCNpilot_BF_INOC_scaffold_40632
Species: Acinetobacter baumannii (100%)
2 1007 bp 38.83 3.74 83.71
SCNpilot_BF_INOC_scaffold_40551
Species: Acinetobacter sp. NIPH 284 (50%)
2 1008 bp 38.29 7.22 76.49
SCNpilot_BF_INOC_scaffold_40555
Species: Acinetobacter gyllenbergii (100%)
1 1008 bp 39.78 2.74 85.12
SCNpilot_BF_INOC_scaffold_40558
Species: Acinetobacter sp. NIPH 236 (100%)
2 1008 bp 38.59 2.99 97.62
SCNpilot_BF_INOC_scaffold_40486
Species: Acinetobacter sp. NIPH 809 (100%)
1 1010 bp 40.40 3.23 99.80
SCNpilot_BF_INOC_scaffold_40488
Species: Acinetobacter sp. NIPH 236 (50%)
2 1010 bp 39.11 3.73 90.89
SCNpilot_BF_INOC_scaffold_40396
Species: Acinetobacter sp. ANC 3862 (100%)
2 1012 bp 39.03 2.48 99.90
SCNpilot_BF_INOC_scaffold_40419
Species: Acinetobacter beijerinckii (100%)
1 1012 bp 37.94 2.48 61.96
SCNpilot_BF_INOC_scaffold_40282
Species: Acinetobacter sp. NIPH 809 (100%)
1 1016 bp 27.36 2.96 52.85
SCNpilot_BF_INOC_scaffold_40267
Species: Acinetobacter sp. NIPH 809 (50%)
2 1017 bp 28.91 4.44 66.37
SCNpilot_BF_INOC_scaffold_40205
Species: Acinetobacter tjernbergiae (50%)
2 1018 bp 40.67 4.19 85.17
SCNpilot_BF_INOC_scaffold_40207
Species: Acinetobacter sp. NIPH 236 (100%)
1 1018 bp 38.70 2.47 79.57
SCNpilot_BF_INOC_scaffold_40101
Species: Acinetobacter ursingii (50%)
2 1021 bp 29.38 6.64 78.16
SCNpilot_BF_INOC_scaffold_40122
Species: Acinetobacter sp. ANC 3862 (100%)
1 1021 bp 40.94 3.69 90.79
SCNpilot_BF_INOC_scaffold_40137
Species: Acinetobacter sp. CIP 70.18 (100%)
2 1021 bp 39.28 2.21 57.59
SCNpilot_BF_INOC_scaffold_40052
Species: Acinetobacter junii (50%)
2 1023 bp 39.30 3.43 75.07
SCNpilot_BF_INOC_scaffold_57278
Species: Acinetobacter sp. ANC 3862 (100%)
1 1026 bp 33.04 4.40 51.75
SCNpilot_BF_INOC_scaffold_39952
Species: Acinetobacter sp. ANC 3929 (50%)
2 1026 bp 30.02 2.94 43.27
SCNpilot_BF_INOC_scaffold_39953
Species: Acinetobacter sp. NIPH 809 (100%)
1 1026 bp 41.52 3.67 96.49
SCNpilot_BF_INOC_scaffold_39818
Species: Acinetobacter sp. COS3 (50%)
2 1029 bp 43.93 5.12 96.79
SCNpilot_BF_INOC_scaffold_39759
Species: Acinetobacter sp. NIPH 809 (100%)
1 1031 bp 45.59 4.14 99.81
SCNpilot_BF_INOC_scaffold_39747
Species: Acinetobacter sp. NIPH 284 (100%)
2 1032 bp 37.98 3.41 77.33
SCNpilot_BF_INOC_scaffold_39678
Species: Acinetobacter sp. NIPH 236 (100%)
1 1034 bp 37.23 3.40 99.81
SCNpilot_BF_INOC_scaffold_39697
Species: Acinetobacter sp. NIPH 284 (100%)
1 1034 bp 34.72 4.85 67.89
SCNpilot_BF_INOC_scaffold_39556
Species: Acinetobacter sp. NIPH 809 (50%)
2 1038 bp 37.57 4.35 84.10
SCNpilot_BF_INOC_scaffold_39510
Species: Acinetobacter sp. NIPH 236 (100%)
1 1040 bp 37.40 6.52 81.92
SCNpilot_BF_INOC_scaffold_39398
Species: Acinetobacter nectaris (100%)
1 1043 bp 33.94 5.29 94.06
SCNpilot_BF_INOC_scaffold_39404
Species: Acinetobacter baumannii (50%)
2 1043 bp 42.28 5.05 79.39
SCNpilot_BF_INOC_scaffold_39384
Species: Pseudomonas putida (50%)
2 1044 bp 44.16 5.29 103.74
SCNpilot_BF_INOC_scaffold_39389
Species: Acinetobacter sp. NIPH 236 (100%)
1 1044 bp 42.05 4.57 91.95
SCNpilot_BF_INOC_scaffold_39332
Species: Acinetobacter sp. NIPH 809 (100%)
1 1045 bp 41.53 3.60 76.94
SCNpilot_BF_INOC_scaffold_39350
Species: Acinetobacter sp. CIP 64.2 (50%)
2 1045 bp 37.70 3.36 102.77
SCNpilot_BF_INOC_scaffold_39327
Species: Acinetobacter sp. CIP 56.2 (50%)
2 1046 bp 45.41 2.88 83.46
SCNpilot_BF_INOC_scaffold_39292
Species: Acinetobacter sp. NIPH 284 (50%)
2 1047 bp 41.36 3.60 91.98
SCNpilot_BF_INOC_scaffold_39293
Species: Acinetobacter sp. NIPH 809 (50%)
2 1047 bp 39.83 3.84 85.39
SCNpilot_BF_INOC_scaffold_39196
Species: Acinetobacter sp. CIP 56.2 (100%)
1 1050 bp 33.81 5.98 61.43
SCNpilot_BF_INOC_scaffold_39120
Species: Acinetobacter sp. NIPH 236 (50%)
2 1051 bp 37.20 3.58 80.21
SCNpilot_BF_INOC_scaffold_39134
Species: Acinetobacter sp. NIPH 809 (50%)
2 1051 bp 34.06 2.87 65.37
SCNpilot_BF_INOC_scaffold_39109
Species: Acinetobacter sp. NIPH 809 (50%)
2 1052 bp 40.68 3.58 81.84
SCNpilot_BF_INOC_scaffold_39116
Species: Acinetobacter baumannii (50%)
2 1052 bp 41.63 2.86 100.38
SCNpilot_BF_INOC_scaffold_39074
Species: Acinetobacter gyllenbergii (50%)
2 1053 bp 44.16 3.10 99.43
SCNpilot_BF_INOC_scaffold_38964
Species: Acinetobacter sp. NIPH 809 (100%)
1 1056 bp 39.87 4.04 92.61
SCNpilot_BF_INOC_scaffold_38885
Species: Acinetobacter sp. CIP 70.18 (100%)
1 1058 bp 43.48 3.32 99.81
SCNpilot_BF_INOC_scaffold_38894
Species: Acinetobacter sp. NIPH 809 (100%)
2 1058 bp 41.02 5.22 85.07
SCNpilot_BF_INOC_scaffold_38869
Species: Acinetobacter baumannii (50%)
2 1059 bp 42.59 2.84 101.42
Displaying items 1-50 of 1605 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.