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SCNpilot_BF_INOC_scaffold_5300_4

Organism: SCNpilot_BF_INOC_Thiobacillus_strain3_64_20

partial RP 19 / 55 MC: 1 BSCG 17 / 51 ASCG 3 / 38
Location: comp(3604..4209)

Top 3 Functional Annotations

Value Algorithm Source
shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 207.0
  • Bit_score: 318
  • Evalue 6.00e-84
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 182.0
  • Bit_score: 293
  • Evalue 5.40e-77
shikimate 5-dehydrogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003622F6A similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 201.0
  • Bit_score: 346
  • Evalue 1.90e-92

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Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
GCCGGCGCGGTGAACACGCTGACGTTCGATGCCGGCGGCATCCGCGGCGACAACACCGACGGCGCCGGACTGGTGGCCGATCTCACCCGCAACCTGCATTGCACGCTCGCCAGCAAGCGCATCCTGCTGCTCGGTGCCGGCGGCGCGGCGCGCGGCGTGATCGAACCGCTGCTGGAGCAGGCGCCCGCCGCACTCGTCATCGCCAACCGCACCGTCAGCCGGGCACAGGAACTCGCCGGGCTGTTCGGCCGCGGCGTCGCCGCCTGCGGTTTCGACGGCCTCGACACCCCATTCGACCTCATCATCAACGCCACCGCCGCCAGTCTGGCCGGCGAGTTGCCGCCGCTGTCGCCGCGCGTGTTCGCCGCGGGCGCCCTGGCCTACGACATGATGTACGGGCGCGACACGCCTTTCCTCGGCTTCGCCCGCGCGCACGGCGCAGCGACGGCCGACGGCCTCGGCATGCTGGTGGAGCAGGCGGCCGAAGCGTTTTACCTGTGGCGCGGCGTGCGGCCCGACACCGCGCCCGTCATCGCGAACCTGCGCCAAGACCGCCTGGAAGGCGAGAGTCTGGCGGCGTCCCCCCTGCGGGGGCTCCGCACGTGA
PROTEIN sequence
Length: 202
AGAVNTLTFDAGGIRGDNTDGAGLVADLTRNLHCTLASKRILLLGAGGAARGVIEPLLEQAPAALVIANRTVSRAQELAGLFGRGVAACGFDGLDTPFDLIINATAASLAGELPPLSPRVFAAGALAYDMMYGRDTPFLGFARAHGAATADGLGMLVEQAAEAFYLWRGVRPDTAPVIANLRQDRLEGESLAASPLRGLRT*