ggKbase home page

SCNpilot_BF_INOC_scaffold_1486_10

Organism: SCNpilot_BF_INOC_Bacteroidetes_44_10

near complete RP 50 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 4
Location: 10180..10929

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=GWC2_Bacteroidetes_46_850_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 250.0
  • Bit_score: 397
  • Evalue 1.60e-107
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 248.0
  • Bit_score: 374
  • Evalue 2.30e-101
  • rbh
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036FF4BF similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 249.0
  • Bit_score: 451
  • Evalue 6.80e-124

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Bacteroidetes_46_850_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 750
ATGCCCCGTTTCTTTATTACTCTTTCCTATAACGGTAAAAATTACGTGGGTTGGCAGATCCAGCCTAACGGGATGAGTGTGCAGCAAGCTTTGCAGGATGCACTTTCTACCATTTTGAGACAAGAGGTGACAGTGGTGGGGGCTGGCAGGACCGATGCAGGAGTGCATGCCCGTGAGATGATGGCCCATTTCGATTGGGAGGGGAGTATCTTTTCATCCGGGGATCTGGTACATAAACTCAATAACTTCCTACCCAAAGATATTTCCATTTCCGCTATCCGGAAGGTGCGTCCTGAGGCACATGCCCGTTTCAGTGCTGTTTCACGTACTTATAAATATTATGTGACGACGGTGAAAGATCCGTTTCTTCATGAATACACCTATCGGTTATTCTTTCATCCCGATCTTGAGGCCATGAACACCCTCTGTGAAGTGTTGAAAGAATATGAAGACTTTACCAGTTTCAGTAAGTTGCATACTGACGTGAAAACCAATCATTGCCGTATTGAATATGCCTGGTGGGAGAAAAAAGGAGAACTGTATGAATTCACTATTTGTGCCGACCGCTTCCTCCGGAATATGGTGCGTGCTATTGTAGGCACATTGCTTGAAGCGGGTAGGGGACGGCTTGACGAGCAGGGATTCCGCCATATTATTGAAGCCCGGAATCGAAATGTGGCGGGCGACTCCGCGCCGGGACATGCCCTTTTTCTGGAAAAAGTGACTTATCCAGAGAACATCTGGTTATGA
PROTEIN sequence
Length: 250
MPRFFITLSYNGKNYVGWQIQPNGMSVQQALQDALSTILRQEVTVVGAGRTDAGVHAREMMAHFDWEGSIFSSGDLVHKLNNFLPKDISISAIRKVRPEAHARFSAVSRTYKYYVTTVKDPFLHEYTYRLFFHPDLEAMNTLCEVLKEYEDFTSFSKLHTDVKTNHCRIEYAWWEKKGELYEFTICADRFLRNMVRAIVGTLLEAGRGRLDEQGFRHIIEARNRNVAGDSAPGHALFLEKVTYPENIWL*