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SCNpilot_BF_INOC_scaffold_25794_2

Organism: SCNpilot_BF_INOC_Bacteroidetes_44_10

near complete RP 50 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 4
Location: comp(368..1477)

Top 3 Functional Annotations

Value Algorithm Source
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:KKB53912.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 377.0
  • Bit_score: 511
  • Evalue 8.80e-142
TonB-linked outer membrane protein, SusC/RagA family id=3870435 bin=GWC2_Bacteroidetes_46_850 species=Parabacteroides sp. ASF519 genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 372.0
  • Bit_score: 501
  • Evalue 6.50e-139
membrane protein similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 379.0
  • Bit_score: 483
  • Evalue 4.00e-134

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Taxonomy

Parabacteroides gordonii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1110
GACAGCCGTTTGAACATCGATGCTACCTATTATAAGGAAAACACCAAGGATCAGATTATGGATATCTCTGTTCCAAGTGTATCAGGTATCAAACAACAGTTGATCAACGCTGGTAATATCCAAAACCAGGGTGTGGAAATTGCATTGAACACAATCCCCTTCCGTAACAAAGATTGGGAATGGAATTTGGATTTCACCTATACAAAGAATGAGAATAAGGTAATCGAACTACACCCTAACGTAGCAAATTACATTGCTCTGCGTGGTGATGTTGCTTATGGTAACTATCGTATCGGTTCTGTTGCCCAGGTGGGTGGTGCTTACGGTTTGTTGTTGACAGACTCTAAACCAGCTATCGACAAAGCTACAGGAAAGAAAATCTTACGTTTCACAAACAACGGTCGTGCAGCTTACTATGCTCGTAGCGGTAAAATCGAAGAGATCGGATCATTGACTCCAGACTTCCTGGGCTCTGTATCAACAGGTCTTCGTTATAAAAACATTACCATGCGTGCTGCATTGGATATGCGTTTTGGTGGTTACGTAGCATCTTACAACAACCGTTACGGTATGGCTTACGGATACACAGAAACATCCTTAAGATACCGCGATGCTGAACACGGTGGTGTTACCTGGACCAGCAAATATGATGGCAAAACTTACAGCGACGGTGTAATTCCGGATGGTATTTTTGCTGCCGGTACTAAGATTACTCAACCTAACGGTTCATCAGTAGACGTTGGCGGTATGACTTACGAAGCTGCTATGGCTGCCGGTTATGTAGAACCTTCTCACGCTTCTGGTCACCACTACTTCAACAACAGCTGGAGCCAGGGTACAGTTAACGACGATTGGGTAACAAAATTAAATTATATCGCATTGCGCGAAATCTCTTTCGGATACAGTGTTCCTCAGGCTTTTGCAAACAAATTGGGTGCTAAGAGCATGAATCTGGCTTTGTCTGCACGTAACCTTGGTTACCTGTACAACACAATGCCTAACAACGTAAATCCTGAAGGTGTTCGTGGTAACGATGCAACTGAATTCCGCGAGCGTTCATTCAGCCCGTATACTGCTAACTACATGTTTACTATTAATGTAGGCTTCTAA
PROTEIN sequence
Length: 370
DSRLNIDATYYKENTKDQIMDISVPSVSGIKQQLINAGNIQNQGVEIALNTIPFRNKDWEWNLDFTYTKNENKVIELHPNVANYIALRGDVAYGNYRIGSVAQVGGAYGLLLTDSKPAIDKATGKKILRFTNNGRAAYYARSGKIEEIGSLTPDFLGSVSTGLRYKNITMRAALDMRFGGYVASYNNRYGMAYGYTETSLRYRDAEHGGVTWTSKYDGKTYSDGVIPDGIFAAGTKITQPNGSSVDVGGMTYEAAMAAGYVEPSHASGHHYFNNSWSQGTVNDDWVTKLNYIALREISFGYSVPQAFANKLGAKSMNLALSARNLGYLYNTMPNNVNPEGVRGNDATEFRERSFSPYTANYMFTINVGF*