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SCNpilot_BF_INOC_scaffold_161_15

Organism: SCNpilot_BF_INOC_Leifsonia_70_13

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 ASCG 9 / 38
Location: comp(7195..7593)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L22 n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=RL22_CLAMS similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 132.0
  • Bit_score: 219
  • Evalue 2.30e-54
rplV; 50S ribosomal protein L22 similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 132.0
  • Bit_score: 219
  • Evalue 6.50e-55
50S ribosomal protein L22 {ECO:0000255|HAMAP-Rule:MF_01331}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. se similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 132.0
  • Bit_score: 219
  • Evalue 3.20e-54

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 399
ATGGTGGAGTCGATCGCCCGCGTGCGACACATCCGCGTGACGCCTCAGAAGGCCCGTCGCGTCGTGGACCTCATCCGCGGCAAGCAGGCCGAGGAGGCCCTCGCGATCCTGAAGTTCGCGCCCCAGGGTGCGAGCGAGCCCGTGTACAAGCTCGTGGCGTCCGCGATCGCGAACGCCCGCGTGAAGGCGGATGCGACGAACACGTTCCTCGACGAGTCCGACCTCGTCGTGGCCCGCGCGTTCGTCGACGAGGGCACCACGCTCAAGCGGTTCCAGCCGCGTGCCCAGGGTCGCGCGTTCCGCATCAACAAGCGCACGAGCCACATCACCGTCGTGCTCGCCACGCCGGACGAGCCGGTGCTCGCCGGCACGGCCGCTGCGAAGAAGGCAGGTAAGTAA
PROTEIN sequence
Length: 133
MVESIARVRHIRVTPQKARRVVDLIRGKQAEEALAILKFAPQGASEPVYKLVASAIANARVKADATNTFLDESDLVVARAFVDEGTTLKRFQPRAQGRAFRINKRTSHITVVLATPDEPVLAGTAAAKKAGK*