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QH_6_UNK

In projects: QH_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.84 Longest contig: 86.52 Kbp Bin length: 43.49 Mbp GC content: 61.40 %
Contigs count: 17572 Features count: 56719 rRNAs count: 11 tRNAs count: 537

Genome completeness

megabin RP 45 / 55 MC: 35 BSCG 42 / 51 MC: 35 ASCG 38 / 38 MC: 38
Displaying items 17301-17350 of 17572 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_6_scaffold_17734
Species: Natronorubrum bangense (100%)
2 1230 bp 70.08 20.89 100.49
qh_6_scaffold_22556
Species: Nostoc sp. PCC 7524 (50%)
2 1006 bp 60.93 6.26 100.50
qh_6_scaffold_18214
Species: R_OP3X_51_18 (50%)
2 1203 bp 58.27 7.81 100.50
qh_6_scaffold_18351
Species: Halosimplex carlsbadense (50%)
2 1197 bp 71.01 47.62 100.50
qh_6_scaffold_18418 3 1194 bp 54.77 7.96 100.50
qh_6_scaffold_19139
Species: Natronomonas pharaonis (66.67%)
3 1985 bp 65.39 37.83 100.50
qh_6_scaffold_11063
Species: Haloquadratum walsbyi (66.67%)
3 2776 bp 63.94 34.65 100.50
qh_6_scaffold_10863
Order: Halobacteriales (66.67%)
3 1752 bp 66.61 12.27 100.51
qh_6_scaffold_19355
Species: Haloferax sp. ATCC BAA-646 (66.67%)
3 1146 bp 60.30 6.63 100.52
qh_6_scaffold_19420
Species: Sorangium cellulosum (50%)
2 1143 bp 56.34 8.49 100.52
qh_6_scaffold_16062
Species: Halorubrum lipolyticum (50%)
2 1331 bp 71.75 42.82 100.53
qh_6_scaffold_19507
Order: Halobacteriales (50%)
4 1140 bp 66.32 17.63 100.53
qh_6_scaffold_19620
Species: Halococcus thailandensis (100%)
2 1134 bp 61.99 17.28 100.53
qh_6_scaffold_17484
Species: Natronomonas moolapensis (66.67%)
3 2638 bp 67.13 78.92 100.53
qh_6_scaffold_16283 3 1316 bp 56.76 6.38 100.53
qh_6_scaffold_9778
Genus: Halorubrum (66.67%)
3 1871 bp 72.26 74.18 100.53
qh_6_scaffold_23877
Species: Natronomonas moolapensis (66.67%)
3 1492 bp 71.72 70.84 100.54
qh_6_scaffold_11688
Species: Natrialba taiwanensis (50%)
2 1671 bp 63.38 7.24 100.54
qh_6_scaffold_20238
Species: Natronomonas pharaonis (66.67%)
3 1104 bp 71.83 53.99 100.54
qh_6_scaffold_14039
Species: Natronomonas moolapensis (50%)
2 1468 bp 72.48 41.28 100.55
qh_6_scaffold_4092
Species: Candidatus Acetothermus autotrophicum (50%)
2 3103 bp 66.87 35.93 100.55
qh_6_scaffold_8895
Species: Halosimplex carlsbadense (100%)
3 1990 bp 70.00 26.73 100.55
qh_6_scaffold_20983
Species: Halobacterium sp. DL1 (50%)
2 1071 bp 61.06 6.82 100.56
qh_6_scaffold_9122
Species: Haloarcula sinaiiensis (66.67%)
3 1957 bp 69.95 70.72 100.56
qh_6_scaffold_14962
Species: Natronorubrum tibetense (50%)
2 1933 bp 58.82 13.30 100.57
qh_6_scaffold_17956
Species: Halovirus HCTV-5 (100%)
2 1217 bp 49.96 5.42 100.57
qh_6_scaffold_15139
Species: Salinibacter ruber (66.67%)
3 1390 bp 70.72 29.50 100.58
qh_6_scaffold_21714
Species: Natronomonas moolapensis (50%)
2 1041 bp 68.59 66.19 100.58
qh_6_scaffold_12979
Species: Halosimplex carlsbadense (100%)
2 1554 bp 65.44 7.66 100.58
qh_6_scaffold_5701
Species: halophilic archaeon DL31 (100%)
4 2589 bp 61.84 9.39 100.58
qh_6_scaffold_3561 3 4626 bp 55.38 7.33 100.58
qh_6_scaffold_6576
Class: Halobacteria (66.67%)
3 2377 bp 48.76 8.50 100.59
qh_6_scaffold_9838
Species: Natronomonas pharaonis (66.67%)
3 1864 bp 66.63 24.36 100.59
qh_6_scaffold_13327
Species: Haloferax mediterranei (50%)
2 1524 bp 73.49 19.42 100.59
qh_6_scaffold_13353
Species: Halosimplex carlsbadense (100%)
2 1521 bp 66.27 14.79 100.59
qh_6_scaffold_19086
Species: Natrialba magadii (50%)
2 1160 bp 54.91 16.90 100.60
qh_6_scaffold_19263 2 1151 bp 45.26 12.08 100.61
qh_6_scaffold_7014
Order: Halobacteriales (60%)
5 2290 bp 69.74 11.18 100.61
qh_6_scaffold_19817
Species: Natrinema altunense (50%)
2 1124 bp 69.48 5.78 100.62
qh_6_scaffold_16917
Species: Natrinema altunense (66.67%)
3 1279 bp 70.60 9.85 100.63
qh_6_scaffold_12507
Species: Haloferax sp. ATCC BAA-645 (50%)
2 1595 bp 50.16 9.03 100.63
qh_6_scaffold_20126
Species: Natronomonas moolapensis (50%)
2 1109 bp 70.24 47.70 100.63
qh_6_scaffold_13198
Species: Halorubrum lipolyticum (50%)
4 2823 bp 65.00 16.90 100.64
qh_6_scaffold_20452
Species: Halococcus saccharolyticus (50%)
2 1094 bp 70.20 10.69 100.64
qh_6_scaffold_12925
Species: Candidatus Methanoperedens nitroreducens (50%)
2 1559 bp 57.41 7.83 100.64
qh_6_scaffold_17021 2 2444 bp 56.83 6.87 100.66
qh_6_scaffold_15894
Species: Natronococcus occultus (50%)
2 2134 bp 68.18 16.59 100.66
qh_6_scaffold_15083
Species: Salinibacter ruber (100%)
2 2134 bp 67.10 12.75 100.66
qh_6_scaffold_21212 3 1061 bp 68.52 20.36 100.66
qh_6_scaffold_6892
Order: Natrialbales (75%)
4 3281 bp 68.45 23.44 100.67
Displaying items 17301-17350 of 17572 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.