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QH_6_UNK

In projects: QH_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.84 Longest contig: 86.52 Kbp Bin length: 43.49 Mbp GC content: 61.40 %
Contigs count: 17572 Features count: 56719 rRNAs count: 11 tRNAs count: 537

Genome completeness

megabin RP 45 / 55 MC: 35 BSCG 42 / 51 MC: 35 ASCG 38 / 38 MC: 38
Displaying items 301-350 of 17572 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_6_scaffold_17105 2 1267 bp 58.48 6.63 100.40
qh_6_scaffold_22076
Species: Candidatus Halobonum tyrrellensis (100%)
2 1025 bp 68.98 9.07 100.39
qh_6_scaffold_22096
Species: Salinibacter ruber (100%)
2 1025 bp 66.24 12.98 100.39
qh_6_scaffold_7427 3 2576 bp 71.58 39.75 100.39
qh_6_scaffold_3978
Species: Haloferax elongans (57.14%)
7 7848 bp 70.29 11.61 100.38
qh_6_scaffold_26570
Species: Halococcus salifodinae (50%)
2 1309 bp 72.19 21.53 100.38
qh_6_scaffold_23395
Species: Natronomonas pharaonis (66.67%)
3 1605 bp 72.09 42.31 100.37
qh_6_scaffold_3266
Order: Halobacteriales (66.67%)
3 3485 bp 59.86 14.55 100.37
qh_6_scaffold_21135 3 1880 bp 69.57 13.14 100.37
qh_6_scaffold_11876
Species: Natronomonas pharaonis (50%)
2 1653 bp 70.78 42.77 100.36
qh_6_scaffold_20262
Species: Natronomonas moolapensis (50%)
2 1103 bp 75.34 82.59 100.36
qh_6_scaffold_18845
Genus: Haloarcula (100%)
5 2493 bp 69.31 12.61 100.36
qh_6_scaffold_33590
Species: Halococcus salifodinae (50%)
2 1109 bp 71.15 10.01 100.36
qh_6_scaffold_14114
Order: Natrialbales (66.67%)
3 1946 bp 77.90 69.06 100.36
qh_6_scaffold_19762
Species: Haloarcula amylolytica (66.67%)
3 1127 bp 69.39 14.82 100.35
qh_6_scaffold_8971
Species: Natronomonas pharaonis (100%)
2 1979 bp 67.81 14.30 100.35
qh_6_scaffold_11167
Species: uncultured archaeon A07HB70 (66.67%)
3 1722 bp 66.14 70.38 100.35
qh_6_scaffold_27737
Species: Salinibacter ruber (100%)
2 1435 bp 64.04 77.63 100.35
qh_6_scaffold_19255
Species: Haloferax elongans (50%)
2 1151 bp 72.02 21.11 100.35
qh_6_scaffold_11856
Species: Natronomonas moolapensis (100%)
2 2652 bp 68.51 82.03 100.34
qh_6_scaffold_12772
Order: Halobacteriales (66.67%)
6 2075 bp 65.83 10.65 100.34
qh_6_scaffold_25993
Species: Salinibacter ruber (66.67%)
3 1483 bp 62.71 27.44 100.34
qh_6_scaffold_17909
Species: Natronomonas pharaonis (50%)
2 1220 bp 69.59 13.85 100.33
qh_6_scaffold_15578
Species: Natronomonas pharaonis (50%)
6 2751 bp 68.23 58.81 100.33
qh_6_scaffold_17653
Species: Natronomonas pharaonis (50%)
2 1235 bp 70.53 33.68 100.32
qh_6_scaffold_4091
Order: Halobacteriales (66.67%)
3 3104 bp 59.73 21.13 100.32
qh_6_scaffold_28878
Species: Natronococcus amylolyticus (100%)
2 1244 bp 72.91 45.74 100.32
qh_6_scaffold_17305
Species: Natronomonas moolapensis (50%)
2 1256 bp 71.50 19.03 100.32
qh_6_scaffold_3905
Class: Halobacteria (75%)
4 3179 bp 53.48 7.39 100.32
qh_6_scaffold_3878
Species: Halosimplex carlsbadense (66.67%)
6 3188 bp 69.20 12.52 100.31
qh_6_scaffold_20959
Order: Halobacteriales (66.67%)
3 2243 bp 70.80 59.65 100.31
qh_6_scaffold_16843
Species: Natronomonas pharaonis (50%)
2 1283 bp 69.52 31.41 100.31
qh_6_scaffold_16923
Species: Natronomonas pharaonis (66.67%)
3 1947 bp 68.98 41.60 100.31
qh_6_scaffold_16378
Species: Leptolyngbya sp. PCC 7375 (50%)
2 1310 bp 56.79 6.41 100.31
qh_6_scaffold_16011
Species: Salinibacter ruber (50%)
2 1334 bp 50.67 5.77 100.30
qh_6_scaffold_15810
Species: Natronomonas pharaonis (50%)
2 1346 bp 71.03 61.37 100.30
qh_6_scaffold_15806
Species: Halogranum salarium (50%)
2 1346 bp 68.72 7.88 100.30
qh_6_scaffold_11572
Order: Halobacteriales (66.67%)
3 1684 bp 71.67 10.21 100.30
qh_6_scaffold_22430
Species: Desulfobacula toluolica (50%)
2 1011 bp 47.68 4.95 100.30
qh_6_scaffold_22368
Species: Haloarcula japonica (50%)
2 1014 bp 69.92 11.05 100.30
qh_6_scaffold_22214
Species: Halobacterium sp. DL1 (50%)
2 1020 bp 64.61 19.31 100.29
qh_6_scaffold_22120
Species: Natronorubrum bangense (66.67%)
3 1023 bp 53.37 5.08 100.29
qh_6_scaffold_5232 3 5136 bp 52.98 7.59 100.29
qh_6_scaffold_1328
Genus: Haloarcula (100%)
7 7541 bp 60.56 24.39 100.29
qh_6_scaffold_5591
Order: Haloferacales (66.67%)
3 3123 bp 69.52 16.97 100.29
qh_6_scaffold_15127
Species: Tolypothrix campylonemoides (50%)
2 1391 bp 43.78 4.10 100.29
qh_6_scaffold_21641
Species: Halostagnicola sp. A56 (50%)
2 1044 bp 72.61 16.76 100.29
qh_6_scaffold_10971
Species: Burkholderia sp. lig30 (66.67%)
3 1741 bp 41.87 5.46 100.29
qh_6_scaffold_1914
Order: Halobacteriales (66.67%)
3 5226 bp 60.18 16.42 100.29
qh_6_scaffold_21562
Species: Candidatus Entotheonella sp. TSY1 (50%)
2 1047 bp 63.42 6.69 100.29
Displaying items 301-350 of 17572 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.