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QH_6_UNK

In projects: QH_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.84 Longest contig: 86.52 Kbp Bin length: 43.49 Mbp GC content: 61.40 %
Contigs count: 17572 Features count: 56719 rRNAs count: 11 tRNAs count: 537

Genome completeness

megabin RP 45 / 55 MC: 35 BSCG 42 / 51 MC: 35 ASCG 38 / 38 MC: 38
Displaying items 501-550 of 17572 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_6_scaffold_19393 2 1145 bp 58.08 5.50 79.91
qh_6_scaffold_16696 2 1292 bp 56.27 5.50 98.45
qh_6_scaffold_21396 2 1053 bp 54.13 5.51 66.10
qh_6_scaffold_10352
Domain: Bacteria (50%)
4 3505 bp 42.80 5.51 51.10
qh_6_scaffold_20975 2 1071 bp 56.21 5.51 87.68
qh_6_scaffold_20310
Order: Natrialbales (66.67%)
3 1852 bp 51.40 5.51 72.89
qh_6_scaffold_11743 3 1666 bp 50.00 5.52 60.50
qh_6_scaffold_22361 2 1014 bp 45.46 5.52 77.81
qh_6_scaffold_14301 3 1449 bp 61.63 5.52 98.34
qh_6_scaffold_21453
Species: Halorubrum sp. AJ67 (100%)
1 1051 bp 53.66 5.52 97.34
qh_6_scaffold_10635 4 1774 bp 59.41 5.52 61.89
qh_6_scaffold_21489 3 1050 bp 58.00 5.52 92.86
qh_6_scaffold_17112
Phylum: Parcubacteria (50%)
4 1267 bp 42.86 5.52 82.16
qh_6_scaffold_10689 4 2536 bp 53.86 5.52 98.90
qh_6_scaffold_15637
Species: Halorubrum coriense (100%)
1 1357 bp 60.21 5.53 87.99
qh_6_scaffold_16806
Species: Halovirus HGTV-1 (100%)
1 1285 bp 39.92 5.53 53.93
qh_6_scaffold_25858 4 1646 bp 48.30 5.53 80.01
qh_6_scaffold_10831 3 1754 bp 55.19 5.53 39.00
qh_6_scaffold_16824 1 1284 bp 57.71 5.53 18.69
qh_6_scaffold_21994
Species: R_Bacteroidetes_44_7 (50%)
2 1030 bp 39.81 5.53 81.84
qh_6_scaffold_21535 1 1048 bp 51.62 5.53 64.41
qh_6_scaffold_18776 1 1175 bp 52.85 5.53 99.06
qh_6_scaffold_18789
Species: RBG_13_Chloroflexi_51_36_curated (50%)
2 1175 bp 61.53 5.53 100.09
qh_6_scaffold_9732
Species: Synechococcus phage S-CBM2 (100%)
1 1877 bp 57.11 5.54 96.86
qh_6_scaffold_17764 1 1228 bp 48.29 5.54 29.32
qh_6_scaffold_17790 2 1227 bp 51.18 5.54 53.06
qh_6_scaffold_36184
Species: Salinibacter ruber (50%)
2 1353 bp 51.88 5.54 44.57
qh_6_scaffold_16268
Species: Rhodothermus marinus (50%)
2 1317 bp 61.28 5.54 96.13
qh_6_scaffold_24605 1 1712 bp 54.79 5.55 34.17
qh_6_scaffold_18827 3 1856 bp 54.69 5.55 97.95
qh_6_scaffold_12222
Species: Rhodothermus marinus (66.67%)
3 1622 bp 58.26 5.55 81.94
qh_6_scaffold_15452
Species: RBG_16_Ignavibacteria_34_14_curated (100%)
1 1369 bp 40.76 5.55 91.38
qh_6_scaffold_16009
Species: Candidatus Brocadia sinica (50%)
2 1334 bp 42.80 5.55 97.15
qh_6_scaffold_22520
Species: Candidatus Nanosalinarum sp. J07AB56 (50%)
2 1007 bp 55.91 5.56 58.09
qh_6_scaffold_15204 2 1385 bp 52.56 5.56 91.62
qh_6_scaffold_11299
Class: Halobacteria (66.67%)
3 1710 bp 49.59 5.56 86.32
qh_6_scaffold_20765 1 1080 bp 55.37 5.56 99.72
qh_6_scaffold_26022
Species: Candidatus Methylomirabilis oxyfera (50%)
2 1673 bp 63.36 5.56 89.66
qh_6_scaffold_18526 1 1188 bp 34.68 5.56 75.00
qh_6_scaffold_9285 3 3036 bp 51.45 5.57 98.22
qh_6_scaffold_14472
Genus: Halococcus (66.67%)
3 1436 bp 52.23 5.57 70.61
qh_6_scaffold_20011 2 1114 bp 52.51 5.57 99.37
qh_6_scaffold_18929
Species: Halorubrum sp. AJ67 (50%)
2 1168 bp 53.34 5.57 92.72
qh_6_scaffold_18252 2 1202 bp 39.85 5.57 94.09
qh_6_scaffold_8856 3 2910 bp 57.42 5.57 95.88
qh_6_scaffold_15794 2 1346 bp 55.35 5.57 33.66
qh_6_scaffold_27739 5 2228 bp 53.37 5.57 65.44
qh_6_scaffold_17018 1 1273 bp 55.22 5.58 15.55
qh_6_scaffold_33449 3 1200 bp 50.25 5.58 58.75
qh_6_scaffold_35081
Species: Haloferax lucentense (66.67%)
3 1236 bp 53.24 5.58 77.43
Displaying items 501-550 of 17572 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.