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QH_6_UNK

In projects: QH_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.84 Longest contig: 86.52 Kbp Bin length: 43.49 Mbp GC content: 61.40 %
Contigs count: 17572 Features count: 56719 rRNAs count: 11 tRNAs count: 537

Genome completeness

megabin RP 45 / 55 MC: 35 BSCG 42 / 51 MC: 35 ASCG 38 / 38 MC: 38
Displaying items 1601-1650 of 17572 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_6_scaffold_9769 3 1873 bp 49.44 6.57 50.13
qh_6_scaffold_11958 3 2695 bp 56.62 6.57 48.65
qh_6_scaffold_6662 8 5312 bp 52.15 6.57 57.04
qh_6_scaffold_16135
Species: Haloarcula sinaiiensis (100%)
1 1325 bp 49.74 6.57 99.85
qh_6_scaffold_21207
Species: Nostoc sp. PCC 7524 (50%)
2 1660 bp 56.33 6.57 81.51
qh_6_scaffold_13165
Species: Rhodothermus marinus (100%)
1 1538 bp 65.34 6.57 99.87
qh_6_scaffold_13172
Species: Serratia plymuthica (50%)
2 1538 bp 61.31 6.57 91.68
qh_6_scaffold_21475
Species: Halorubrum coriense (100%)
2 1050 bp 54.48 6.57 94.00
qh_6_scaffold_3099 10 6927 bp 51.68 6.57 90.04
qh_6_scaffold_32413
Species: Streptomyces aurantiacus (50%)
2 1324 bp 67.90 6.57 100.15
qh_6_scaffold_2734 6 6014 bp 56.60 6.57 72.03
qh_6_scaffold_3767 3 3242 bp 55.49 6.57 71.62
qh_6_scaffold_9657 6 1886 bp 52.92 6.57 95.44
qh_6_scaffold_10020 4 3713 bp 53.70 6.57 46.38
qh_6_scaffold_10735 2 1765 bp 66.12 6.57 100.11
qh_6_scaffold_19509 3 1140 bp 59.91 6.58 58.42
qh_6_scaffold_22302 3 1534 bp 62.13 6.58 76.47
qh_6_scaffold_18851 1 1171 bp 57.56 6.58 99.91
qh_6_scaffold_21189 3 2112 bp 46.54 6.58 38.21
qh_6_scaffold_21881 2 1034 bp 52.13 6.58 55.42
qh_6_scaffold_11538 2 1688 bp 52.25 6.58 98.28
qh_6_scaffold_8986 3 1976 bp 56.43 6.58 86.99
qh_6_scaffold_10164
Species: Natronorubrum tibetense (50%)
2 1825 bp 57.37 6.58 39.45
qh_6_scaffold_33770 4 1383 bp 60.23 6.58 77.66
qh_6_scaffold_10180 3 1824 bp 55.15 6.58 94.57
qh_6_scaffold_9428 4 1915 bp 56.76 6.58 87.26
qh_6_scaffold_21519 3 1048 bp 57.25 6.58 105.63
qh_6_scaffold_9209 3 1945 bp 52.80 6.58 67.25
qh_6_scaffold_21532
Species: R_Alphaproteobacteria_66_14 (100%)
1 1048 bp 56.87 6.58 99.62
qh_6_scaffold_9911 3 1854 bp 55.02 6.58 74.92
qh_6_scaffold_18565
Species: Halorubrum lipolyticum (50%)
2 1186 bp 48.15 6.58 89.80
qh_6_scaffold_9712 4 3579 bp 55.46 6.59 73.34
qh_6_scaffold_16974
Species: Halosimplex carlsbadense (50%)
2 1275 bp 64.39 6.59 100.00
qh_6_scaffold_16978 1 1275 bp 56.16 6.59 99.76
qh_6_scaffold_8451
Species: RLO_PLX_64_10 (100%)
1 2050 bp 49.22 6.59 99.80
qh_6_scaffold_1954 4 4552 bp 56.30 6.59 69.27
qh_6_scaffold_17244
Species: Haloterrigena turkmenica (100%)
1 1259 bp 61.87 6.59 99.84
qh_6_scaffold_22314
Species: GWA2_Bacteroidetes_31_9_curated (100%)
1 1016 bp 56.20 6.59 99.80
qh_6_scaffold_12881 1 1563 bp 55.41 6.59 69.87
qh_6_scaffold_20492 2 1092 bp 47.89 6.59 29.12
qh_6_scaffold_7623
Species: Pleurocapsa minor (50%)
2 2185 bp 54.32 6.59 83.07
qh_6_scaffold_18018
Order: Bacteroidetes Order II. Incertae sedis (100%)
3 1214 bp 58.81 6.59 86.24
qh_6_scaffold_9009
Species: RLO_PLX_64_10 (50%)
2 1974 bp 56.38 6.59 98.02
qh_6_scaffold_3395 3 3427 bp 54.60 6.59 50.42
qh_6_scaffold_3949 7 5251 bp 54.66 6.59 72.50
qh_6_scaffold_14820
Order: Halobacteriales (66.67%)
3 1412 bp 57.72 6.59 73.73
qh_6_scaffold_12528
Domain: Bacteria (50%)
4 1593 bp 66.42 6.59 91.53
qh_6_scaffold_13687 4 2125 bp 53.55 6.59 63.81
qh_6_scaffold_4449
Species: Halorubrum sp. AJ67 (100%)
2 2976 bp 51.78 6.59 90.12
qh_6_scaffold_2155 6 5414 bp 52.59 6.59 51.98
Displaying items 1601-1650 of 17572 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.