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QH_6_UNK

In projects: QH_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.84 Longest contig: 86.52 Kbp Bin length: 43.49 Mbp GC content: 61.40 %
Contigs count: 17572 Features count: 56719 rRNAs count: 11 tRNAs count: 537

Genome completeness

megabin RP 45 / 55 MC: 35 BSCG 42 / 51 MC: 35 ASCG 38 / 38 MC: 38
Displaying items 17201-17250 of 17572 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_6_scaffold_18820
Species: halophilic archaeon J07HX5 (100%)
2 1173 bp 69.99 8.78 100.26
qh_6_scaffold_5267
Species: Natronomonas pharaonis (66.67%)
3 2708 bp 69.39 62.52 100.26
qh_6_scaffold_32732
Species: Salinibacter ruber (100%)
2 1158 bp 67.18 45.85 100.26
qh_6_scaffold_13125
Species: halophilic archaeon J07HB67 (50%)
2 1541 bp 67.68 17.20 100.26
qh_6_scaffold_9380
Species: Halorhabdus utahensis (50%)
2 1921 bp 67.46 13.01 100.26
qh_6_scaffold_9381
Class: Halobacteria (66.67%)
3 1921 bp 78.45 37.53 100.26
qh_6_scaffold_19354
Class: Halobacteria (66.67%)
3 1146 bp 69.98 30.10 100.26
qh_6_scaffold_19431
Genus: Haloarcula (66.67%)
3 1143 bp 70.52 12.95 100.26
qh_6_scaffold_19915
Species: Halococcus saccharolyticus (50%)
2 1119 bp 69.62 13.05 100.27
qh_6_scaffold_19923
Species: Halococcus salifodinae (50%)
2 1119 bp 70.69 11.89 100.27
qh_6_scaffold_20051
Species: Opitutaceae bacterium TAV5 (50%)
2 1113 bp 63.25 14.38 100.27
qh_6_scaffold_18435
Species: Halococcus saccharolyticus (50%)
2 2223 bp 69.68 18.89 100.27
qh_6_scaffold_10146
Species: Natronomonas moolapensis (50%)
2 1828 bp 70.73 14.99 100.27
qh_6_scaffold_7569
Species: Haloquadratum walsbyi (100%)
2 2193 bp 62.79 8.98 100.27
qh_6_scaffold_14136
Species: Haladaptatus paucihalophilus (50%)
2 1460 bp 41.92 6.78 100.27
qh_6_scaffold_20557
Species: halophilic archaeon DL31 (50%)
2 1089 bp 62.81 6.61 100.28
qh_6_scaffold_20921
Species: halophilic archaeon J07HX5 (50%)
2 1074 bp 70.86 13.31 100.28
qh_6_scaffold_21122
Species: Haloarcula argentinensis (50%)
2 1065 bp 68.45 7.89 100.28
qh_6_scaffold_10639
Species: Natronomonas moolapensis (66.67%)
3 1774 bp 73.39 42.50 100.28
qh_6_scaffold_14823
Genus: Natronomonas (50%)
6 2836 bp 70.20 13.61 100.28
qh_6_scaffold_21196
Species: Natronomonas pharaonis (50%)
2 1062 bp 67.23 25.89 100.28
qh_6_scaffold_14818
Species: Halosimplex carlsbadense (50%)
2 1412 bp 72.31 30.38 100.28
qh_6_scaffold_21562
Species: Candidatus Entotheonella sp. TSY1 (50%)
2 1047 bp 63.42 6.69 100.29
qh_6_scaffold_1914
Order: Halobacteriales (66.67%)
3 5226 bp 60.18 16.42 100.29
qh_6_scaffold_10971
Species: Burkholderia sp. lig30 (66.67%)
3 1741 bp 41.87 5.46 100.29
qh_6_scaffold_21641
Species: Halostagnicola sp. A56 (50%)
2 1044 bp 72.61 16.76 100.29
qh_6_scaffold_15127
Species: Tolypothrix campylonemoides (50%)
2 1391 bp 43.78 4.10 100.29
qh_6_scaffold_5591
Order: Haloferacales (66.67%)
3 3123 bp 69.52 16.97 100.29
qh_6_scaffold_1328
Genus: Haloarcula (100%)
7 7541 bp 60.56 24.39 100.29
qh_6_scaffold_5232 3 5136 bp 52.98 7.59 100.29
qh_6_scaffold_22120
Species: Natronorubrum bangense (66.67%)
3 1023 bp 53.37 5.08 100.29
qh_6_scaffold_22214
Species: Halobacterium sp. DL1 (50%)
2 1020 bp 64.61 19.31 100.29
qh_6_scaffold_22368
Species: Haloarcula japonica (50%)
2 1014 bp 69.92 11.05 100.30
qh_6_scaffold_22430
Species: Desulfobacula toluolica (50%)
2 1011 bp 47.68 4.95 100.30
qh_6_scaffold_11572
Order: Halobacteriales (66.67%)
3 1684 bp 71.67 10.21 100.30
qh_6_scaffold_15810
Species: Natronomonas pharaonis (50%)
2 1346 bp 71.03 61.37 100.30
qh_6_scaffold_15806
Species: Halogranum salarium (50%)
2 1346 bp 68.72 7.88 100.30
qh_6_scaffold_16011
Species: Salinibacter ruber (50%)
2 1334 bp 50.67 5.77 100.30
qh_6_scaffold_16378
Species: Leptolyngbya sp. PCC 7375 (50%)
2 1310 bp 56.79 6.41 100.31
qh_6_scaffold_16923
Species: Natronomonas pharaonis (66.67%)
3 1947 bp 68.98 41.60 100.31
qh_6_scaffold_16843
Species: Natronomonas pharaonis (50%)
2 1283 bp 69.52 31.41 100.31
qh_6_scaffold_20959
Order: Halobacteriales (66.67%)
3 2243 bp 70.80 59.65 100.31
qh_6_scaffold_3878
Species: Halosimplex carlsbadense (66.67%)
6 3188 bp 69.20 12.52 100.31
qh_6_scaffold_3905
Class: Halobacteria (75%)
4 3179 bp 53.48 7.39 100.32
qh_6_scaffold_17305
Species: Natronomonas moolapensis (50%)
2 1256 bp 71.50 19.03 100.32
qh_6_scaffold_28878
Species: Natronococcus amylolyticus (100%)
2 1244 bp 72.91 45.74 100.32
qh_6_scaffold_4091
Order: Halobacteriales (66.67%)
3 3104 bp 59.73 21.13 100.32
qh_6_scaffold_17653
Species: Natronomonas pharaonis (50%)
2 1235 bp 70.53 33.68 100.32
qh_6_scaffold_15578
Species: Natronomonas pharaonis (50%)
6 2751 bp 68.23 58.81 100.33
qh_6_scaffold_17909
Species: Natronomonas pharaonis (50%)
2 1220 bp 69.59 13.85 100.33
Displaying items 17201-17250 of 17572 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.