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QH_6_UNK

In projects: QH_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.84 Longest contig: 86.52 Kbp Bin length: 43.49 Mbp GC content: 61.40 %
Contigs count: 17572 Features count: 56719 rRNAs count: 11 tRNAs count: 537

Genome completeness

megabin RP 45 / 55 MC: 35 BSCG 42 / 51 MC: 35 ASCG 38 / 38 MC: 38
Displaying items 351-400 of 17572 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_6_scaffold_14818
Species: Halosimplex carlsbadense (50%)
2 1412 bp 72.31 30.38 100.28
qh_6_scaffold_21196
Species: Natronomonas pharaonis (50%)
2 1062 bp 67.23 25.89 100.28
qh_6_scaffold_14823
Genus: Natronomonas (50%)
6 2836 bp 70.20 13.61 100.28
qh_6_scaffold_10639
Species: Natronomonas moolapensis (66.67%)
3 1774 bp 73.39 42.50 100.28
qh_6_scaffold_21122
Species: Haloarcula argentinensis (50%)
2 1065 bp 68.45 7.89 100.28
qh_6_scaffold_20921
Species: halophilic archaeon J07HX5 (50%)
2 1074 bp 70.86 13.31 100.28
qh_6_scaffold_20557
Species: halophilic archaeon DL31 (50%)
2 1089 bp 62.81 6.61 100.28
qh_6_scaffold_14136
Species: Haladaptatus paucihalophilus (50%)
2 1460 bp 41.92 6.78 100.27
qh_6_scaffold_7569
Species: Haloquadratum walsbyi (100%)
2 2193 bp 62.79 8.98 100.27
qh_6_scaffold_10146
Species: Natronomonas moolapensis (50%)
2 1828 bp 70.73 14.99 100.27
qh_6_scaffold_18435
Species: Halococcus saccharolyticus (50%)
2 2223 bp 69.68 18.89 100.27
qh_6_scaffold_20051
Species: Opitutaceae bacterium TAV5 (50%)
2 1113 bp 63.25 14.38 100.27
qh_6_scaffold_19915
Species: Halococcus saccharolyticus (50%)
2 1119 bp 69.62 13.05 100.27
qh_6_scaffold_19923
Species: Halococcus salifodinae (50%)
2 1119 bp 70.69 11.89 100.27
qh_6_scaffold_19431
Genus: Haloarcula (66.67%)
3 1143 bp 70.52 12.95 100.26
qh_6_scaffold_19354
Class: Halobacteria (66.67%)
3 1146 bp 69.98 30.10 100.26
qh_6_scaffold_9380
Species: Halorhabdus utahensis (50%)
2 1921 bp 67.46 13.01 100.26
qh_6_scaffold_9381
Class: Halobacteria (66.67%)
3 1921 bp 78.45 37.53 100.26
qh_6_scaffold_13125
Species: halophilic archaeon J07HB67 (50%)
2 1541 bp 67.68 17.20 100.26
qh_6_scaffold_32732
Species: Salinibacter ruber (100%)
2 1158 bp 67.18 45.85 100.26
qh_6_scaffold_5267
Species: Natronomonas pharaonis (66.67%)
3 2708 bp 69.39 62.52 100.26
qh_6_scaffold_18820
Species: halophilic archaeon J07HX5 (100%)
2 1173 bp 69.99 8.78 100.26
qh_6_scaffold_18581
Species: Halosimplex carlsbadense (50%)
2 1185 bp 59.83 6.16 100.25
qh_6_scaffold_18479
Species: Candidatus Halobonum tyrrellensis (50%)
2 1191 bp 77.16 16.20 100.25
qh_6_scaffold_6515
Genus: Halococcus (66.67%)
3 2388 bp 68.63 18.26 100.25
qh_6_scaffold_18224
Species: RLO_Entotheonella_69_37 (50%)
2 1203 bp 47.13 5.32 100.25
qh_6_scaffold_12261
Species: Haloarcula californiae (50%)
2 1619 bp 76.96 44.22 100.25
qh_6_scaffold_18000
Species: Natronomonas moolapensis (100%)
2 1215 bp 74.32 48.48 100.25
qh_6_scaffold_17842
Species: Natronomonas pharaonis (50%)
2 1224 bp 70.59 19.85 100.25
qh_6_scaffold_30308
Species: Natronomonas moolapensis (100%)
2 1227 bp 72.13 36.27 100.24
qh_6_scaffold_17421
Species: Halococcus saccharolyticus (50%)
2 1248 bp 66.91 39.18 100.24
qh_6_scaffold_16984
Species: Halopiger xanaduensis (50%)
2 1275 bp 60.63 8.78 100.24
qh_6_scaffold_11426
Species: uncultured archaeon A07HR60 (66.67%)
3 1700 bp 68.88 65.24 100.24
qh_6_scaffold_11288
Order: Halobacteriales (66.67%)
3 1712 bp 56.02 17.00 100.23
qh_6_scaffold_16768
Species: Natronomonas pharaonis (50%)
4 1287 bp 65.66 39.86 100.23
qh_6_scaffold_7289
Species: marine sediment metagenome (50%)
2 3466 bp 52.31 6.95 100.23
qh_6_scaffold_20935
Species: Cyanothece sp. ATCC 51142 (50%)
2 1739 bp 46.69 21.22 100.23
qh_6_scaffold_16413
Species: Natronomonas moolapensis (50%)
2 1308 bp 71.71 30.28 100.23
qh_6_scaffold_5536
Species: halophilic archaeon DL31 (66.67%)
3 2631 bp 66.97 22.42 100.23
qh_6_scaffold_15938 3 1338 bp 53.51 8.74 100.22
qh_6_scaffold_15939 2 1338 bp 43.12 5.61 100.22
qh_6_scaffold_15841
Species: Haloferax volcanii (50%)
2 1344 bp 57.59 6.47 100.22
qh_6_scaffold_15690
Species: Halosimplex carlsbadense (50%)
2 1353 bp 73.84 16.11 100.22
qh_6_scaffold_15654
Species: Natronomonas moolapensis (50%)
2 1356 bp 73.08 43.22 100.22
qh_6_scaffold_15663
Species: Natronomonas pharaonis (50%)
2 1356 bp 74.41 52.29 100.22
qh_6_scaffold_1982
Class: Halobacteria (100%)
5 4523 bp 60.89 23.35 100.22
qh_6_scaffold_9610
Species: Haloarcula vallismortis (50%)
2 2715 bp 62.28 18.42 100.22
qh_6_scaffold_10110
Species: Natronomonas pharaonis (75%)
4 1832 bp 67.52 45.47 100.22
qh_6_scaffold_10086 3 1835 bp 53.90 5.89 100.22
qh_6_scaffold_23605
Domain: Bacteria (66.67%)
3 2299 bp 69.64 9.05 100.22
Displaying items 351-400 of 17572 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.