ggKbase home page
Advanced Search
Search Help

QH_7_UNK

In projects: QH_7  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 25.29 Longest contig: 83.04 Kbp Bin length: 52.16 Mbp GC content: 60.76 %
Contigs count: 21495 Features count: 67681 rRNAs count: 18 tRNAs count: 616

Genome completeness

megabin RP 53 / 55 MC: 42 BSCG 42 / 51 MC: 32 ASCG 38 / 38 MC: 38
Displaying items 21051-21100 of 21495 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_7_scaffold_10714
Order: Halobacteriales (66.67%)
3 1816 bp 60.46 8.59 100.28
qh_7_scaffold_7074
Species: Natronomonas pharaonis (100%)
2 2893 bp 71.55 40.93 100.28
qh_7_scaffold_15095
Species: Haloarcula vallismortis (50%)
2 1445 bp 69.20 14.60 100.28
qh_7_scaffold_15178
Species: Thermoplasmatales archaeon SCGC AB-539-N05 (50%)
2 1439 bp 69.49 5.91 100.28
qh_7_scaffold_22739
Species: Halococcus salifodinae (100%)
2 1074 bp 70.11 8.47 100.28
qh_7_scaffold_18615
Genus: Halobacterium (66.67%)
3 1789 bp 69.26 10.01 100.28
qh_7_scaffold_16648 3 1783 bp 46.38 6.90 100.28
qh_7_scaffold_22894
Species: Haloferax mediterranei (50%)
2 1068 bp 71.72 10.02 100.28
qh_7_scaffold_22965
Species: Halovirus HGTV-1 (50%)
2 1065 bp 57.56 10.23 100.28
qh_7_scaffold_8393
Species: Haladaptatus paucihalophilus (50%)
2 2127 bp 65.26 10.34 100.28
qh_7_scaffold_23158
Species: Haloterrigena limicola (50%)
2 1059 bp 42.59 3.97 100.28
qh_7_scaffold_15629 2 1409 bp 50.32 8.66 100.28
qh_7_scaffold_23411
Class: Halobacteria (100%)
3 1050 bp 68.76 13.62 100.29
qh_7_scaffold_23564
Species: Monosiga brevicollis (50%)
2 1044 bp 55.56 5.46 100.29
qh_7_scaffold_34258
Species: Haloarcula hispanica (50%)
2 1382 bp 70.33 14.33 100.29
qh_7_scaffold_11052
Order: Haloferacales (50%)
4 2743 bp 71.56 15.97 100.29
qh_7_scaffold_24090
Species: Halosimplex carlsbadense (50%)
2 1026 bp 72.42 16.37 100.29
qh_7_scaffold_16409
Species: Chthonomonas calidirosea (50%)
2 1361 bp 66.64 9.26 100.29
qh_7_scaffold_7924
Species: Haloquadratum walsbyi (75%)
4 3380 bp 65.59 12.22 100.30
qh_7_scaffold_24470
Species: Natronomonas pharaonis (50%)
2 1014 bp 73.08 6.71 100.30
qh_7_scaffold_24650
Species: Natronomonas pharaonis (50%)
2 1008 bp 70.83 42.76 100.30
qh_7_scaffold_13468 4 3688 bp 43.33 27.90 100.30
qh_7_scaffold_9180 3 2010 bp 66.92 7.06 100.30
qh_7_scaffold_24765
Species: Thiorhodococcus sp. AK35 (50%)
2 1005 bp 71.64 7.36 100.30
qh_7_scaffold_28185
Species: Halobacterium sp. DL1 (100%)
2 1337 bp 66.79 18.70 100.30
qh_7_scaffold_18863
Species: Natronomonas pharaonis (100%)
2 1992 bp 70.68 29.94 100.30
qh_7_scaffold_12666
Order: Haloferacales (66.67%)
3 1630 bp 74.60 43.01 100.31
qh_7_scaffold_7528
Species: marine sediment metagenome (66.67%)
3 2279 bp 45.28 35.15 100.31
qh_7_scaffold_17872
Species: Catenovulum agarivorans (50%)
2 1280 bp 65.39 18.28 100.31
qh_7_scaffold_36035
Species: Halorubrum coriense (50%)
2 1274 bp 62.72 8.95 100.31
qh_7_scaffold_18006
Order: Halobacteriales (66.67%)
3 1274 bp 66.64 8.16 100.31
qh_7_scaffold_27033
Order: Halobacteriales (66.67%)
3 1265 bp 70.43 55.97 100.32
qh_7_scaffold_13373
Class: Halobacteria (50%)
4 1570 bp 45.92 6.69 100.32
qh_7_scaffold_9473
Species: Natronomonas pharaonis (66.67%)
3 2488 bp 71.18 52.29 100.32
qh_7_scaffold_18769
Species: Calothrix sp. PCC 7507 (50%)
2 1238 bp 58.32 6.22 100.32
qh_7_scaffold_18081 5 3086 bp 48.28 6.80 100.32
qh_7_scaffold_13775
Species: Salinarchaeum sp. Harcht-Bsk1 (100%)
2 1540 bp 68.57 19.68 100.33
qh_7_scaffold_14321
Species: Thioploca ingrica (50%)
2 2766 bp 63.38 20.50 100.33
qh_7_scaffold_19274
Species: Halostagnicola larsenii (50%)
4 1214 bp 66.64 8.98 100.33
qh_7_scaffold_19263
Species: Halorhabdus utahensis (50%)
4 1214 bp 62.03 10.05 100.33
qh_7_scaffold_5726
Order: Haloferacales (66.67%)
3 2727 bp 75.47 47.71 100.33
qh_7_scaffold_34671
Species: RBG_19FT_COMBO_Chloroflexi_56_12_curated (50%)
2 1510 bp 65.83 6.69 100.33
qh_7_scaffold_19580
Species: Natronomonas moolapensis (50%)
2 1199 bp 71.31 14.76 100.33
qh_7_scaffold_19646
Species: Monosiga brevicollis (50%)
2 1196 bp 53.18 5.10 100.33
qh_7_scaffold_11021
Genus: Haloarcula (50%)
4 1782 bp 66.95 14.87 100.34
qh_7_scaffold_19824
Species: Haloquadratum walsbyi (50%)
2 1187 bp 51.90 5.22 100.34
qh_7_scaffold_5912
Species: Haloferax sulfurifontis (100%)
3 2670 bp 65.54 8.20 100.34
qh_7_scaffold_20888
Order: Haloferacales (66.67%)
3 2072 bp 66.26 9.46 100.34
qh_7_scaffold_20023
Species: Methanocaldococcus infernus (50%)
2 1178 bp 72.67 9.68 100.34
qh_7_scaffold_20038
Species: Halorhabdus utahensis (100%)
2 1178 bp 68.08 9.85 100.34
Displaying items 21051-21100 of 21495 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.