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QH_7_UNK

In projects: QH_7  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 25.29 Longest contig: 83.04 Kbp Bin length: 52.16 Mbp GC content: 60.76 %
Contigs count: 21495 Features count: 67681 rRNAs count: 18 tRNAs count: 616

Genome completeness

megabin RP 53 / 55 MC: 42 BSCG 42 / 51 MC: 32 ASCG 38 / 38 MC: 38
Displaying items 751-800 of 21495 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_7_scaffold_20313
Species: Halosimplex carlsbadense (50%)
2 1961 bp 78.23 28.96 42.68
qh_7_scaffold_18782
Phylum: Cyanobacteria (66.67%)
3 1237 bp 35.81 23.04 42.68
qh_7_scaffold_16281
Species: Halococcus saccharolyticus (50%)
2 1370 bp 66.64 23.36 42.70
qh_7_scaffold_22680 3 1974 bp 48.99 6.33 42.71
qh_7_scaffold_18193 1 1264 bp 46.76 6.72 42.72
qh_7_scaffold_19266 3 1214 bp 60.21 6.59 42.75
qh_7_scaffold_23070
Species: Halonotius sp. J07HN6 (100%)
1 1677 bp 52.12 28.56 42.75
qh_7_scaffold_21620
Species: Halogeometricum borinquense (50%)
2 1115 bp 58.30 17.13 42.78
qh_7_scaffold_23088 3 1774 bp 54.17 8.00 42.78
qh_7_scaffold_11513 4 3281 bp 47.88 7.74 42.79
qh_7_scaffold_10522 2 1836 bp 48.53 32.95 42.81
qh_7_scaffold_19058
Order: Natrialbales (50%)
4 2887 bp 60.79 20.19 42.81
qh_7_scaffold_14415
Species: RBG_19FT_COMBO_Chloroflexi_56_12_curated (50%)
2 1492 bp 59.45 27.21 42.83
qh_7_scaffold_14608
Species: Halosimplex carlsbadense (66.67%)
3 3992 bp 60.75 26.48 42.84
qh_7_scaffold_21661
Species: Candidatus Thiomargarita nelsonii (50%)
2 1113 bp 42.68 8.98 42.86
qh_7_scaffold_20986
Species: Cyanothece sp. PCC 7424 (100%)
1 1141 bp 42.86 132.25 42.86
qh_7_scaffold_25089
Species: Halalkalicoccus jeotgali (50%)
2 1827 bp 61.25 10.13 42.86
qh_7_scaffold_18459
Species: uncultured archaeon A07HB70 (100%)
1 1252 bp 61.90 8.55 42.89
qh_7_scaffold_24886
Species: Salinibacter ruber (100%)
3 2497 bp 61.87 21.74 42.89
qh_7_scaffold_5324 3 4251 bp 51.73 6.16 42.91
qh_7_scaffold_29348
Species: Halococcus saccharolyticus (50%)
2 1104 bp 72.01 61.96 42.93
qh_7_scaffold_23265 1 1055 bp 41.80 13.46 42.94
qh_7_scaffold_23647
Species: Natronomonas pharaonis (100%)
1 1041 bp 60.33 13.74 42.94
qh_7_scaffold_21378
Species: Rhizobium sp. LPU83 (50%)
2 1124 bp 43.15 6.85 42.97
qh_7_scaffold_23490
Species: [Oscillatoria] sp. PCC 6506 (100%)
2 1047 bp 42.12 58.36 42.98
qh_7_scaffold_16640
Species: Natronomonas moolapensis (50%)
2 1347 bp 55.68 15.07 42.98
qh_7_scaffold_21256 2 1130 bp 52.21 9.12 43.01
qh_7_scaffold_25936
Order: Halobacteriales (66.67%)
3 1374 bp 59.46 17.90 43.01
qh_7_scaffold_12721
Species: Halococcus saccharolyticus (100%)
1 1625 bp 52.68 35.02 43.02
qh_7_scaffold_17849
Species: Cystobacter violaceus (50%)
2 1282 bp 61.08 7.18 43.06
qh_7_scaffold_30912
Species: Porphyromonas sp. COT-108 OH1349 (100%)
1 1532 bp 58.94 92.56 43.08
qh_7_scaffold_17682 3 1290 bp 49.15 4.26 43.10
qh_7_scaffold_11887 2 1698 bp 53.42 26.50 43.11
qh_7_scaffold_10515 3 1837 bp 38.98 33.21 43.11
qh_7_scaffold_14990
Species: [Oscillatoria] sp. PCC 6506 (50%)
2 1453 bp 38.20 6.06 43.15
qh_7_scaffold_9354 2 1986 bp 39.73 17.12 43.20
qh_7_scaffold_22097
Species: Halorubrum saccharovorum (50%)
2 1097 bp 56.70 21.70 43.21
qh_7_scaffold_24877 5 1002 bp 61.38 7.58 43.21
qh_7_scaffold_34722
Species: Halostagnicola sp. A56 (50%)
2 1395 bp 56.63 6.24 43.23
qh_7_scaffold_14359
Domain: Archaea (66.67%)
3 1497 bp 57.38 15.30 43.29
qh_7_scaffold_11253 4 4255 bp 36.80 34.29 43.29
qh_7_scaffold_21909
Species: BJP_IG2069_Anaerolineales_43_63 (50%)
2 1926 bp 61.21 14.43 43.30
qh_7_scaffold_39899
Species: Halorubrum tebenquichense (50%)
2 1066 bp 72.80 25.05 43.34
qh_7_scaffold_19026 2 1765 bp 55.24 7.88 43.34
qh_7_scaffold_45366
Species: Halococcus salifodinae (100%)
1 1057 bp 75.12 22.23 43.42
qh_7_scaffold_41902
Species: Halosimplex carlsbadense (100%)
1 1104 bp 68.75 9.33 43.48
qh_7_scaffold_24711 2 1007 bp 59.29 7.25 43.50
qh_7_scaffold_12370 3 1655 bp 51.78 6.16 43.50
qh_7_scaffold_9889 1 1916 bp 51.20 4.23 43.53
qh_7_scaffold_24773
Species: Halorubrum kocurii (100%)
1 1005 bp 55.22 20.50 43.58
Displaying items 751-800 of 21495 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.