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QH_7_UNK

In projects: QH_7  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 25.29 Longest contig: 83.04 Kbp Bin length: 52.16 Mbp GC content: 60.76 %
Contigs count: 21495 Features count: 67681 rRNAs count: 18 tRNAs count: 616

Genome completeness

megabin RP 53 / 55 MC: 42 BSCG 42 / 51 MC: 32 ASCG 38 / 38 MC: 38
Displaying items 251-300 of 21495 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_7_scaffold_24469
Species: RBG_16_Archaea_50_20_curated (100%)
1 1014 bp 69.43 4.54 100.00
qh_7_scaffold_23791
Species: Salinibacter ruber (100%)
1 1036 bp 53.09 4.54 99.61
qh_7_scaffold_20878 2 1145 bp 43.06 4.54 88.03
qh_7_scaffold_21459
Species: R_KAZAN_48_13 (50%)
2 1121 bp 47.10 4.55 44.16
qh_7_scaffold_23242 2 1056 bp 44.41 4.55 93.47
qh_7_scaffold_19397
Species: marine sediment metagenome (100%)
1 1208 bp 45.53 4.55 99.83
qh_7_scaffold_20892 1 1144 bp 54.63 4.55 10.75
qh_7_scaffold_5051 6 2946 bp 46.33 4.55 91.75
qh_7_scaffold_17540 3 1297 bp 37.01 4.55 98.77
qh_7_scaffold_10330
Species: Halorhabdus tiamatea (50%)
2 1862 bp 41.25 4.56 92.64
qh_7_scaffold_20422
Species: Methanolobus psychrophilus (50%)
2 1163 bp 49.01 4.56 84.09
qh_7_scaffold_22694 4 1075 bp 58.42 4.56 78.42
qh_7_scaffold_30653
Species: Halobacillus sp. BBL2006 (100%)
1 1510 bp 53.25 4.57 47.88
qh_7_scaffold_23396
Species: Halorubrum terrestre (100%)
1 1050 bp 40.29 4.57 79.43
qh_7_scaffold_19500
Species: RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated (100%)
1 1202 bp 43.84 4.58 99.83
qh_7_scaffold_14210
Species: Natronorubrum bangense (50%)
2 1507 bp 47.11 4.58 89.18
qh_7_scaffold_20624
Species: Haloterrigena turkmenica (50%)
2 1813 bp 47.71 4.58 67.18
qh_7_scaffold_16779
Species: marine sediment metagenome (50%)
2 2329 bp 35.08 4.59 99.44
qh_7_scaffold_11533 3 2503 bp 54.25 4.59 82.82
qh_7_scaffold_15882
Species: Natronomonas moolapensis (50%)
2 1393 bp 47.31 4.59 51.26
qh_7_scaffold_17361
Species: Halococcus thailandensis (50%)
2 1308 bp 43.35 4.59 83.49
qh_7_scaffold_22998 2 1065 bp 34.37 4.60 73.24
qh_7_scaffold_11000
Species: marine sediment metagenome (50%)
2 1783 bp 48.46 4.60 94.90
qh_7_scaffold_17582
Species: Candidatus Brocadia sinica (50%)
2 2085 bp 47.72 4.60 84.17
qh_7_scaffold_23649 1 1041 bp 58.02 4.61 100.00
qh_7_scaffold_23023
Species: Aphanocapsa montana (50%)
2 1064 bp 40.23 4.61 99.53
qh_7_scaffold_8272 1 2148 bp 52.61 4.61 10.06
qh_7_scaffold_10873
Species: RifOxyA12_full_Proteobacteria_58_15_curated (50%)
2 1800 bp 36.33 4.61 97.50
qh_7_scaffold_30349 3 1498 bp 41.92 4.61 51.67
qh_7_scaffold_24351
Species: Halorubrum lacusprofundi (100%)
1 1018 bp 68.76 4.62 99.61
qh_7_scaffold_24376 2 1017 bp 54.28 4.62 31.56
qh_7_scaffold_20292
Species: Natrinema pellirubrum (100%)
1 1168 bp 36.82 4.62 99.91
qh_7_scaffold_23729
Species: halophilic archaeon J07HB67 (100%)
2 1038 bp 66.76 4.62 82.08
qh_7_scaffold_23114
Species: Natrinema gari (50%)
2 1060 bp 56.32 4.62 89.43
qh_7_scaffold_23116 2 1060 bp 48.49 4.62 98.77
qh_7_scaffold_39388
Species: Halobacterium sp. (50%)
2 1429 bp 55.63 4.62 59.20
qh_7_scaffold_24414
Species: halophilic archaeon J07HX5 (50%)
2 1016 bp 59.55 4.63 98.62
qh_7_scaffold_16762
Species: Environmental Halophage eHP-25 (50%)
2 1340 bp 33.36 4.63 87.31
qh_7_scaffold_18028
Species: Xenorhabdus poinarii (50%)
2 1273 bp 46.43 4.63 55.38
qh_7_scaffold_10958
Species: Cyanidioschyzon merolae (50%)
2 1789 bp 55.79 4.64 71.10
qh_7_scaffold_38297
Species: Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_40_17 (50%)
2 1359 bp 37.38 4.64 62.47
qh_7_scaffold_18929 2 1229 bp 42.23 4.64 100.08
qh_7_scaffold_34667
Species: Salinibacter ruber (50%)
2 1443 bp 56.48 4.64 51.14
qh_7_scaffold_16472
Species: R_OD1_Jorgensenbacteria_45_25b (100%)
1 1357 bp 38.91 4.64 68.09
qh_7_scaffold_23882 3 1033 bp 51.60 4.65 64.18
qh_7_scaffold_17656
Species: Candidatus Halobonum tyrrellensis (50%)
2 1291 bp 52.83 4.65 85.05
qh_7_scaffold_21040 1 1139 bp 40.65 4.65 99.82
qh_7_scaffold_15807 5 2515 bp 38.65 4.65 76.94
qh_7_scaffold_11620 2 1722 bp 46.40 4.65 71.95
qh_7_scaffold_20003 1 1179 bp 35.54 4.66 65.90
Displaying items 251-300 of 21495 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.