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QH_8_UNK

In projects: QH_8  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 24.80 Longest contig: 129.40 Kbp Bin length: 65.07 Mbp GC content: 61.69 %
Contigs count: 26699 Features count: 85647 rRNAs count: 16 tRNAs count: 794

Genome completeness

megabin RP 52 / 55 MC: 46 BSCG 46 / 51 MC: 44 ASCG 38 / 38 MC: 38
Displaying items 251-300 of 26699 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_8_scaffold_28028
Species: Natronomonas pharaonis (100%)
2 1106 bp 67.36 15.64 100.90
qh_8_scaffold_10785
Species: Methanosarcina sp. Kolksee (50%)
2 2215 bp 40.00 5.51 100.90
qh_8_scaffold_11643
Species: Halogeometricum pallidum (50%)
4 2108 bp 71.16 12.90 100.90
qh_8_scaffold_34756 3 1353 bp 61.86 122.54 100.89
qh_8_scaffold_19448 3 1475 bp 56.47 7.53 100.88
qh_8_scaffold_39039
Species: Desulfotignum phosphitoxidans (66.67%)
3 1478 bp 58.25 11.64 100.88
qh_8_scaffold_13162
Species: Enterococcus faecalis (50%)
2 4473 bp 62.42 6.89 100.87
qh_8_scaffold_13893
Species: Dactylococcopsis salina (50%)
2 1871 bp 58.58 12.13 100.86
qh_8_scaffold_11504
Species: Halococcus saccharolyticus (75%)
4 2124 bp 62.62 6.83 100.85
qh_8_scaffold_16259 5 1678 bp 58.58 6.14 100.83
qh_8_scaffold_28439
Species: Halosimplex carlsbadense (100%)
2 1092 bp 67.95 12.18 100.82
qh_8_scaffold_38313
Class: Halobacteria (66.67%)
3 1488 bp 72.72 46.64 100.81
qh_8_scaffold_12610
Species: Halostagnicola sp. A56 (66.67%)
3 1994 bp 62.54 13.09 100.80
qh_8_scaffold_27354
Species: Halobacterium sp. DL1 (100%)
2 1131 bp 70.03 10.26 100.80
qh_8_scaffold_31132
Species: Haloquadratum walsbyi (50%)
2 1015 bp 57.14 6.90 100.79
qh_8_scaffold_18519
Species: Salinibacter ruber (100%)
2 1527 bp 69.55 12.64 100.79
qh_8_scaffold_23512
Species: Gimesia maris (50%)
2 1274 bp 67.03 8.71 100.79
qh_8_scaffold_23433
Species: Haloarcula sinaiiensis (50%)
2 1277 bp 67.11 12.76 100.78
qh_8_scaffold_23127 2 1289 bp 45.54 4.73 100.78
qh_8_scaffold_12013
Order: Halobacteriales (50%)
4 2066 bp 64.96 21.10 100.77
qh_8_scaffold_20444
Order: Halobacteriales (66.67%)
3 1423 bp 70.48 14.69 100.77
qh_8_scaffold_13134
Species: Hassallia byssoidea (50%)
2 1944 bp 67.44 6.94 100.77
qh_8_scaffold_27756
Species: Vitellibacter vladivostokensis (50%)
2 1819 bp 58.93 18.91 100.77
qh_8_scaffold_39566 4 1301 bp 49.35 5.76 100.77
qh_8_scaffold_13208
Class: Halobacteria (100%)
7 2766 bp 68.40 19.16 100.76
qh_8_scaffold_25450
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
4 1197 bp 65.25 11.70 100.75
qh_8_scaffold_12156
Species: Halorubrum lipolyticum (66.67%)
3 2534 bp 65.94 35.08 100.75
qh_8_scaffold_29098
Order: Natrialbales (66.67%)
3 1072 bp 57.56 39.65 100.75
qh_8_scaffold_28991
Species: Salinibacter ruber (50%)
2 1075 bp 58.60 32.47 100.74
qh_8_scaffold_35066
Order: Halobacteriales (80%)
5 1626 bp 63.78 16.85 100.74
qh_8_scaffold_24334
Species: Cyanothece sp. PCC 7822 (50%)
2 1239 bp 47.22 6.13 100.73
qh_8_scaffold_16557 2 1656 bp 35.27 3.99 100.73
qh_8_scaffold_24098
Species: Halogeometricum borinquense (100%)
2 1248 bp 70.03 29.41 100.72
qh_8_scaffold_9717
Class: Halobacteria (100%)
3 2368 bp 65.92 12.54 100.72
qh_8_scaffold_14382
Species: Salinarchaeum sp. Harcht-Bsk1 (66.67%)
3 1826 bp 69.17 14.79 100.71
qh_8_scaffold_23678
Species: Haloarcula hispanica (50%)
2 1266 bp 65.96 43.92 100.71
qh_8_scaffold_27485
Species: halophilic archaeon DL31 (50%)
2 1126 bp 42.63 5.33 100.71
qh_8_scaffold_9547
Class: Halobacteria (66.67%)
3 2395 bp 66.39 13.49 100.71
qh_8_scaffold_55145
Species: Halogranum salarium (50%)
2 1135 bp 63.88 7.49 100.71
qh_8_scaffold_22599
Genus: Natronomonas (66.67%)
3 1847 bp 71.90 17.43 100.70
qh_8_scaffold_15798
Species: Andalucia godoyi (50%)
2 1713 bp 39.70 90.37 100.70
qh_8_scaffold_22971
Species: Halosimplex carlsbadense (100%)
4 1296 bp 60.80 7.48 100.69
qh_8_scaffold_11158
Species: Haloarcula vallismortis (50%)
2 2169 bp 60.49 15.50 100.69
qh_8_scaffold_26480
Species: sediment metagenome (100%)
2 1159 bp 63.24 22.52 100.69
qh_8_scaffold_19834
Species: Parabacteroides distasonis (50%)
2 1454 bp 54.54 5.23 100.69
qh_8_scaffold_8932 5 3793 bp 55.76 7.28 100.69
qh_8_scaffold_30767
Species: Crinalium epipsammum (50%)
2 1025 bp 52.20 67.02 100.68
qh_8_scaffold_26066
Species: Halococcus hamelinensis (100%)
2 1174 bp 56.05 7.33 100.68
qh_8_scaffold_25733
Species: Haloarcula japonica (100%)
3 1186 bp 45.62 5.06 100.68
qh_8_scaffold_19218
Order: Halobacteriales (66.67%)
3 1487 bp 66.24 13.18 100.67
Displaying items 251-300 of 26699 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.