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QH_8_UNK

In projects: QH_8  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 24.80 Longest contig: 129.40 Kbp Bin length: 65.07 Mbp GC content: 61.69 %
Contigs count: 26699 Features count: 85647 rRNAs count: 16 tRNAs count: 794

Genome completeness

megabin RP 52 / 55 MC: 46 BSCG 46 / 51 MC: 44 ASCG 38 / 38 MC: 38
Displaying items 25801-25850 of 26699 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_8_scaffold_27030
Species: Halogranum salarium (50%)
2 1141 bp 61.61 8.50 42.86
qh_8_scaffold_30377
Species: Halosimplex carlsbadense (100%)
1 1036 bp 64.67 44.11 42.86
qh_8_scaffold_53307
Species: Rhodothermus marinus (50%)
2 1044 bp 65.52 9.29 42.82
qh_8_scaffold_46819
Genus: Natronomonas (66.67%)
3 1108 bp 70.58 55.23 42.78
qh_8_scaffold_27172 3 2195 bp 50.02 13.67 42.78
qh_8_scaffold_24280
Species: Halorubrum lacusprofundi (50%)
2 1242 bp 59.58 15.14 42.75
qh_8_scaffold_25177
Species: Halococcus morrhuae (100%)
1 1207 bp 58.57 5.47 42.75
qh_8_scaffold_47589
Species: Halogranum salarium (100%)
1 1418 bp 55.99 6.42 42.74
qh_8_scaffold_30223 2 1039 bp 62.08 8.28 42.73
qh_8_scaffold_21602
Species: Natronomonas pharaonis (100%)
1 1362 bp 64.54 33.63 42.73
qh_8_scaffold_17452 3 1594 bp 55.71 6.02 42.72
qh_8_scaffold_24960
Species: Haladaptatus paucihalophilus (100%)
1 1988 bp 58.90 108.45 42.71
qh_8_scaffold_21143 3 1385 bp 61.88 21.37 42.67
qh_8_scaffold_15325 2 1751 bp 55.51 14.16 42.66
qh_8_scaffold_19495 4 2413 bp 51.76 7.92 42.64
qh_8_scaffold_27253 2 1134 bp 54.32 11.73 42.59
qh_8_scaffold_20417
Species: Fibrisoma limi (50%)
2 1424 bp 54.49 10.60 42.56
qh_8_scaffold_27430
Species: Salinibacter ruber (100%)
1 1128 bp 58.69 34.84 42.55
qh_8_scaffold_11998
Class: Gammaproteobacteria (66.67%)
3 4586 bp 53.75 47.34 42.52
qh_8_scaffold_8792
Species: RBG_13_Planctomycetes_60_9_curated (50%)
2 2522 bp 51.59 8.56 42.47
qh_8_scaffold_20346
Order: Natrialbales (66.67%)
3 1428 bp 46.22 9.03 42.44
qh_8_scaffold_28383
Species: Salinibacter ruber (100%)
2 2022 bp 61.03 11.77 42.43
qh_8_scaffold_12426 4 3169 bp 52.73 6.85 42.41
qh_8_scaffold_32882
Species: Salinibacter ruber (100%)
1 1677 bp 62.25 11.93 42.40
qh_8_scaffold_15520
Species: Photorhabdus asymbiotica (50%)
2 1735 bp 55.68 7.32 42.36
qh_8_scaffold_30182 3 1041 bp 56.39 7.88 42.36
qh_8_scaffold_22661 3 2459 bp 51.32 6.43 42.33
qh_8_scaffold_52755
Species: Haloquadratum sp. J07HQX50 (100%)
1 1205 bp 64.81 47.05 42.32
qh_8_scaffold_31428
Species: Salinibacter ruber (50%)
2 1007 bp 58.09 47.37 42.30
qh_8_scaffold_29364
Species: Physarum polycephalum (50%)
2 1064 bp 54.23 6.02 42.29
qh_8_scaffold_18687
Species: Afipia felis (100%)
1 1518 bp 53.03 15.88 42.29
qh_8_scaffold_22022
Species: Halococcus salifodinae (66.67%)
3 1341 bp 65.10 49.22 42.28
qh_8_scaffold_11361
Class: Halobacteria (66.67%)
3 2143 bp 58.98 30.89 42.28
qh_8_scaffold_49844
Species: Halomicrobium mukohataei (50%)
2 1384 bp 57.59 8.74 42.27
qh_8_scaffold_18264
Species: Haladaptatus paucihalophilus (50%)
2 1541 bp 53.93 8.05 42.25
qh_8_scaffold_22743 1 1307 bp 57.54 20.28 42.23
qh_8_scaffold_24747
Species: Salinibacter ruber (100%)
2 1222 bp 64.65 8.67 42.23
qh_8_scaffold_20051 5 4448 bp 61.53 8.32 42.22
qh_8_scaffold_20730 1 1407 bp 53.94 8.60 42.22
qh_8_scaffold_28123
Order: Halobacteriales (66.67%)
3 1103 bp 65.46 34.09 42.16
qh_8_scaffold_10940 3 2918 bp 52.23 5.76 42.15
qh_8_scaffold_30245
Species: Salinibacter ruber (50%)
2 1040 bp 60.19 66.51 42.12
qh_8_scaffold_17946 2 1560 bp 43.46 22.56 42.12
qh_8_scaffold_24466
Species: Salinibacter ruber (100%)
1 1234 bp 60.37 8.02 42.06
qh_8_scaffold_19932 3 1449 bp 58.45 10.28 42.03
qh_8_scaffold_21427 3 1371 bp 52.66 7.00 42.01
qh_8_scaffold_16232 5 3086 bp 62.67 24.60 42.00
qh_8_scaffold_20311 3 1430 bp 58.25 18.32 41.96
qh_8_scaffold_26252 1 1166 bp 50.17 5.75 41.94
qh_8_scaffold_26994
Species: Halogranum salarium (50%)
2 1152 bp 59.64 33.27 41.93
Displaying items 25801-25850 of 26699 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.