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QH_9_UNK

In projects: QH_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.86 Longest contig: 67.25 Kbp Bin length: 50.11 Mbp GC content: 61.51 %
Contigs count: 22383 Features count: 65940 rRNAs count: 15 tRNAs count: 0

Genome completeness

megabin RP 51 / 55 MC: 48 BSCG 44 / 51 MC: 40 ASCG 38 / 38 MC: 38
Displaying items 22001-22050 of 22383 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_9_scaffold_25222 2 1033 bp 62.73 5.32 100.48
qh_9_scaffold_19885 3 1224 bp 58.50 4.90 100.49
qh_9_scaffold_19886
Species: Halomicrobium mukohataei (50%)
2 1224 bp 74.75 42.73 100.49
qh_9_scaffold_11400
Genus: Haloarcula (50%)
4 2848 bp 68.29 39.12 100.49
qh_9_scaffold_12995
Species: Haloferax elongans (50%)
2 1615 bp 50.59 12.38 100.50
qh_9_scaffold_20238
Species: Halostagnicola larsenii (100%)
3 1209 bp 67.25 14.23 100.50
qh_9_scaffold_10773
Species: Haloquadratum sp. J07HQX50 (50%)
2 1812 bp 59.77 5.74 100.50
qh_9_scaffold_26160
Class: Halobacteria (66.67%)
3 1006 bp 69.98 18.79 100.50
qh_9_scaffold_13079 2 1609 bp 49.91 9.70 100.50
qh_9_scaffold_20487
Species: Salinibacter ruber (50%)
2 1200 bp 62.67 117.00 100.50
qh_9_scaffold_20566
Species: Natrialba asiatica (50%)
2 1197 bp 67.34 18.13 100.50
qh_9_scaffold_15139
Order: Halobacteriales (75%)
4 2755 bp 67.40 11.43 100.51
qh_9_scaffold_21004
Species: Natronomonas moolapensis (50%)
2 1179 bp 68.53 8.91 100.51
qh_9_scaffold_39377
Species: Natronomonas pharaonis (50%)
2 1352 bp 67.31 11.91 100.52
qh_9_scaffold_9706
Species: Haloquadratum walsbyi (50%)
2 1931 bp 64.42 7.25 100.52
qh_9_scaffold_21652
Species: Haloquadratum walsbyi (100%)
2 1155 bp 50.74 16.80 100.52
qh_9_scaffold_21720
Species: Natronomonas moolapensis (100%)
2 1152 bp 73.61 23.44 100.52
qh_9_scaffold_9876
Species: Haloarcula marismortui (50%)
2 1913 bp 71.62 10.14 100.52
qh_9_scaffold_6416
Species: Halosimplex carlsbadense (50%)
6 2480 bp 67.74 46.41 100.52
qh_9_scaffold_17600
Species: Halonotius sp. J07HN6 (50%)
4 1328 bp 63.86 10.92 100.53
qh_9_scaffold_10029
Domain: Bacteria (66.67%)
3 1895 bp 53.14 6.54 100.53
qh_9_scaffold_22145 3 1137 bp 59.89 5.72 100.53
qh_9_scaffold_22295
Species: Halococcus hamelinensis (50%)
2 1131 bp 65.25 7.34 100.53
qh_9_scaffold_22311
Species: Haloarcula argentinensis (50%)
2 1131 bp 64.28 12.11 100.53
qh_9_scaffold_27485
Species: Halorubrum hochstenium (50%)
2 1683 bp 71.84 20.20 100.54
qh_9_scaffold_18028
Species: Haloarcula japonica (50%)
2 1307 bp 67.18 40.86 100.54
qh_9_scaffold_22900
Species: Halobacterium sp. DL1 (100%)
2 1110 bp 61.89 31.08 100.54
qh_9_scaffold_23451
Species: Natrinema altunense (66.67%)
3 1089 bp 72.91 27.73 100.55
qh_9_scaffold_23460
Class: Halobacteria (66.67%)
3 1089 bp 72.54 25.90 100.55
qh_9_scaffold_18998
Species: Halosimplex carlsbadense (75%)
4 1262 bp 68.54 15.37 100.55
qh_9_scaffold_7141
Class: Halobacteria (66.67%)
3 2327 bp 47.36 8.17 100.56
qh_9_scaffold_19756
Species: Halorubrum lacusprofundi (50%)
2 1229 bp 53.86 9.52 100.57
qh_9_scaffold_11493
Class: Halobacteria (100%)
3 1745 bp 47.34 4.93 100.57
qh_9_scaffold_13597
Species: Halosimplex carlsbadense (75%)
4 1569 bp 66.86 18.04 100.57
qh_9_scaffold_8578 3 2085 bp 70.94 11.18 100.58
qh_9_scaffold_20342
Species: Haloferax lucentense (50%)
2 1205 bp 62.32 10.79 100.58
qh_9_scaffold_1078
Domain: Bacteria (75%)
8 6618 bp 51.41 15.05 100.59
qh_9_scaffold_17140
Species: Halomicrobium mukohataei (50%)
2 1351 bp 73.13 10.95 100.59
qh_9_scaffold_12099
Species: Halorubrum hochstenium (50%)
2 1688 bp 72.27 10.55 100.59
qh_9_scaffold_20928
Species: Flammeovirgaceae bacterium 311 (50%)
2 1181 bp 62.57 6.94 100.59
qh_9_scaffold_28655
Species: Halorubrum tebenquichense (75%)
4 1682 bp 71.76 10.82 100.59
qh_9_scaffold_17442
Species: Haloarcula hispanica (50%)
4 1336 bp 64.60 15.12 100.60
qh_9_scaffold_14561
Species: Salinibacter ruber (100%)
3 1503 bp 65.40 8.92 100.60
qh_9_scaffold_7964
Species: Halococcus saccharolyticus (50%)
4 3170 bp 63.31 9.81 100.60
qh_9_scaffold_14743
Order: Natrialbales (50%)
4 1491 bp 62.24 6.77 100.60
qh_9_scaffold_21578
Phylum: Firmicutes (66.67%)
3 1157 bp 27.83 4.15 100.61
qh_9_scaffold_31239
Species: Salinibacter ruber (100%)
2 1476 bp 61.99 99.66 100.61
qh_9_scaffold_18321 3 1291 bp 58.56 14.18 100.62
qh_9_scaffold_22417
Species: Haloarcula amylolytica (50%)
2 1127 bp 69.83 9.85 100.62
qh_9_scaffold_22506
Species: Natronomonas pharaonis (66.67%)
3 1124 bp 68.59 50.98 100.62
Displaying items 22001-22050 of 22383 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.