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QH_9_UNK

In projects: QH_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.86 Longest contig: 67.25 Kbp Bin length: 50.11 Mbp GC content: 61.51 %
Contigs count: 22383 Features count: 65940 rRNAs count: 15 tRNAs count: 0

Genome completeness

megabin RP 51 / 55 MC: 48 BSCG 44 / 51 MC: 40 ASCG 38 / 38 MC: 38
Displaying items 22151-22200 of 22383 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_9_scaffold_18702
Species: Halosimplex carlsbadense (50%)
2 2087 bp 46.77 4.36 43.27
qh_9_scaffold_17955 3 1310 bp 55.11 4.35 67.33
qh_9_scaffold_7383 3 2279 bp 52.57 4.34 44.89
qh_9_scaffold_25906 1 1013 bp 61.99 4.34 99.80
qh_9_scaffold_25082
Species: His2 virus (50%)
2 1037 bp 52.17 4.34 100.68
qh_9_scaffold_24401 1 1059 bp 49.39 4.34 47.59
qh_9_scaffold_17892 2 1313 bp 36.02 4.34 90.48
qh_9_scaffold_16050 3 1406 bp 34.42 4.34 72.76
qh_9_scaffold_20522 1 1199 bp 44.62 4.34 80.07
qh_9_scaffold_8327 3 2123 bp 53.51 4.33 77.16
qh_9_scaffold_16916
Species: Rhodothermus marinus (50%)
2 2330 bp 47.21 4.33 100.82
qh_9_scaffold_17859
Species: Bacteroides faecis CAG:32 (50%)
2 1315 bp 53.92 4.33 91.25
qh_9_scaffold_18822
Species: Salinibacter ruber (50%)
2 1269 bp 59.81 4.33 91.96
qh_9_scaffold_21675 2 1154 bp 54.33 4.33 96.45
qh_9_scaffold_24210
Species: RBG_16_Micrarchaeota_36_9_curated (50%)
2 1065 bp 50.99 4.32 79.44
qh_9_scaffold_14528
Species: Triatoma infestans (100%)
1 1506 bp 52.59 4.32 99.80
qh_9_scaffold_25664 1 1020 bp 46.27 4.31 89.41
qh_9_scaffold_19207
Species: uncultured haloarchaeon (100%)
1 1253 bp 44.05 4.31 99.36
qh_9_scaffold_17708 3 1323 bp 42.33 4.31 67.35
qh_9_scaffold_22105 2 1138 bp 42.79 4.31 99.65
qh_9_scaffold_23306
Species: Emiliania huxleyi (100%)
1 1094 bp 43.33 4.30 99.82
qh_9_scaffold_15501 5 1442 bp 37.31 4.30 97.78
qh_9_scaffold_15512
Species: Haloterrigena thermotolerans (50%)
2 1441 bp 49.62 4.30 97.43
qh_9_scaffold_18120 2 1302 bp 45.31 4.30 30.65
qh_9_scaffold_22713
Species: Prevotella sp. CAG:1092 (50%)
2 1116 bp 33.96 4.30 91.94
qh_9_scaffold_12001
Species: Salinibacter ruber (50%)
2 1698 bp 50.71 4.30 88.34
qh_9_scaffold_25457 1 1026 bp 58.97 4.29 99.71
qh_9_scaffold_22043
Phylum: Cyanobacteria (66.67%)
3 1141 bp 30.32 4.29 71.52
qh_9_scaffold_24668 2 1050 bp 54.29 4.29 63.43
qh_9_scaffold_19582
Species: Fibrella aestuarina (100%)
1 1236 bp 53.24 4.29 74.03
qh_9_scaffold_24744 1 1048 bp 40.46 4.29 99.62
qh_9_scaffold_18982
Species: Salinibacter ruber (100%)
1 1263 bp 41.33 4.28 99.76
qh_9_scaffold_24636
Species: Haloferax larsenii (50%)
2 1051 bp 51.76 4.28 100.19
qh_9_scaffold_13977
Species: Natrinema pallidum (100%)
1 1543 bp 53.86 4.28 82.05
qh_9_scaffold_25157 3 1658 bp 51.51 4.28 47.95
qh_9_scaffold_20080 1 1216 bp 41.78 4.28 80.43
qh_9_scaffold_24583 2 1053 bp 41.69 4.27 99.72
qh_9_scaffold_24592
Species: Lysinibacillus sinduriensis (50%)
2 1053 bp 52.71 4.27 91.74
qh_9_scaffold_16975 1 1359 bp 53.64 4.27 87.64
qh_9_scaffold_5634 6 2673 bp 35.05 4.26 90.24
qh_9_scaffold_21768 3 1150 bp 57.13 4.26 92.87
qh_9_scaffold_17415
Species: Natronorubrum tibetense (50%)
2 1337 bp 39.87 4.26 82.12
qh_9_scaffold_23755 1 1080 bp 53.80 4.26 100.00
qh_9_scaffold_15275
Species: Sulfurovum sp. FS08-3 (50%)
2 1455 bp 32.44 4.26 99.59
qh_9_scaffold_21040
Species: Salinarchaeum sp. Harcht-Bsk1 (100%)
1 1177 bp 40.53 4.25 99.91
qh_9_scaffold_16875 2 1364 bp 37.68 4.25 97.87
qh_9_scaffold_24391 3 1059 bp 45.61 4.25 98.58
qh_9_scaffold_25103 2 1036 bp 56.66 4.25 86.58
qh_9_scaffold_2981
Species: GWA2_OP11_nov_40_9 (50%)
2 3808 bp 41.89 4.25 99.58
qh_9_scaffold_15855 6 2046 bp 35.04 4.25 100.00
Displaying items 22151-22200 of 22383 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.