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QH_9_UNK

In projects: QH_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.86 Longest contig: 67.25 Kbp Bin length: 50.11 Mbp GC content: 61.51 %
Contigs count: 22383 Features count: 65940 rRNAs count: 15 tRNAs count: 0

Genome completeness

megabin RP 51 / 55 MC: 48 BSCG 44 / 51 MC: 40 ASCG 38 / 38 MC: 38
Displaying items 501-550 of 22383 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_9_scaffold_5218 3 2789 bp 58.05 4.77 93.58
qh_9_scaffold_16922 3 1362 bp 52.13 4.77 82.60
qh_9_scaffold_19071
Species: Gemmatimonas aurantiaca (100%)
1 1259 bp 58.30 4.77 99.84
qh_9_scaffold_15398 2 1447 bp 55.22 4.77 102.63
qh_9_scaffold_15399
Species: GWB2_Ignavibacteria_35_6b_curated (100%)
1 1447 bp 60.12 4.77 99.72
qh_9_scaffold_24728 3 1048 bp 43.32 4.77 97.04
qh_9_scaffold_11823 3 1716 bp 42.54 4.78 88.46
qh_9_scaffold_17814 3 1317 bp 66.51 4.78 66.29
qh_9_scaffold_13905 3 1548 bp 57.69 4.78 84.88
qh_9_scaffold_24596
Species: uncultured bacterium (50%)
2 1881 bp 35.89 4.78 78.47
qh_9_scaffold_21748 2 1151 bp 56.99 4.78 70.89
qh_9_scaffold_24130
Species: Oreochromis niloticus (50%)
2 1067 bp 53.61 4.78 94.75
qh_9_scaffold_15130
Domain: Bacteria (66.67%)
3 1465 bp 46.83 4.78 90.10
qh_9_scaffold_35131 2 1507 bp 48.91 4.78 47.78
qh_9_scaffold_29764
Species: Halobacterium salinarum (50%)
2 1757 bp 47.69 4.78 41.32
qh_9_scaffold_14215
Species: Haladaptatus paucihalophilus (50%)
2 1528 bp 47.25 4.78 71.66
qh_9_scaffold_24169
Species: Methanocella arvoryzae (50%)
2 1066 bp 63.60 4.78 100.19
qh_9_scaffold_22946 3 1108 bp 59.39 4.78 88.81
qh_9_scaffold_8678 3 2069 bp 54.23 4.78 81.92
qh_9_scaffold_18681 3 1275 bp 52.08 4.78 65.88
qh_9_scaffold_18687
Species: uncultured bacterium (50%)
2 1275 bp 32.00 4.78 93.18
qh_9_scaffold_11630 5 1733 bp 46.45 4.79 62.84
qh_9_scaffold_38356 1 1439 bp 53.51 4.79 90.06
qh_9_scaffold_14266 2 1525 bp 46.69 4.79 45.05
qh_9_scaffold_8695 3 2066 bp 45.06 4.79 63.17
qh_9_scaffold_23000 1 1106 bp 62.57 4.79 54.25
qh_9_scaffold_14547
Order: Halobacteriales (66.67%)
3 1504 bp 36.70 4.79 94.95
qh_9_scaffold_16411 7 2270 bp 36.30 4.80 68.46
qh_9_scaffold_18795 2 1270 bp 42.60 4.80 56.93
qh_9_scaffold_18336 2 1291 bp 56.86 4.80 96.44
qh_9_scaffold_16274 2 1395 bp 52.62 4.80 100.00
qh_9_scaffold_15859 2 1418 bp 52.40 4.80 44.64
qh_9_scaffold_20272 4 2251 bp 51.22 4.80 84.36
qh_9_scaffold_5980
Species: Pseudomonas sp. GM74 (50%)
2 2586 bp 47.14 4.80 94.08
qh_9_scaffold_14307
Species: Salinibacter ruber (50%)
2 1522 bp 56.18 4.80 81.01
qh_9_scaffold_24283 1 1063 bp 51.93 4.80 99.91
qh_9_scaffold_4541
Domain: Bacteria (83.33%)
6 3989 bp 53.72 4.81 92.20
qh_9_scaffold_25005
Species: Natrinema gari (100%)
1 1040 bp 41.83 4.81 99.81
qh_9_scaffold_17114
Species: [Clostridium] leptum (50%)
2 1352 bp 52.22 4.81 67.68
qh_9_scaffold_24339
Species: Nitrosococcus halophilus (50%)
2 1061 bp 48.63 4.81 99.81
qh_9_scaffold_10527 5 3760 bp 49.26 4.81 63.35
qh_9_scaffold_22520 1 1123 bp 35.35 4.81 99.91
qh_9_scaffold_22543 3 1123 bp 58.59 4.81 95.37
qh_9_scaffold_19830
Species: Haloferax mucosum (100%)
1 1226 bp 41.60 4.81 99.84
qh_9_scaffold_20386 3 1204 bp 41.53 4.82 101.66
qh_9_scaffold_22011 2 1142 bp 53.85 4.82 72.50
qh_9_scaffold_6215 4 2529 bp 51.21 4.82 62.16
qh_9_scaffold_15014 2 1473 bp 55.74 4.82 66.19
qh_9_scaffold_12709
Species: Halococcus thailandensis (50%)
2 1638 bp 48.60 4.82 97.25
qh_9_scaffold_34086 3 1660 bp 45.24 4.82 47.35
Displaying items 501-550 of 22383 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.