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QH_9_UNK

In projects: QH_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.86 Longest contig: 67.25 Kbp Bin length: 50.11 Mbp GC content: 61.51 %
Contigs count: 22383 Features count: 65940 rRNAs count: 15 tRNAs count: 0

Genome completeness

megabin RP 51 / 55 MC: 48 BSCG 44 / 51 MC: 40 ASCG 38 / 38 MC: 38
Displaying items 351-400 of 22383 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_9_scaffold_11493
Class: Halobacteria (100%)
3 1745 bp 47.34 4.93 100.57
qh_9_scaffold_19756
Species: Halorubrum lacusprofundi (50%)
2 1229 bp 53.86 9.52 100.57
qh_9_scaffold_7141
Class: Halobacteria (66.67%)
3 2327 bp 47.36 8.17 100.56
qh_9_scaffold_18998
Species: Halosimplex carlsbadense (75%)
4 1262 bp 68.54 15.37 100.55
qh_9_scaffold_23451
Species: Natrinema altunense (66.67%)
3 1089 bp 72.91 27.73 100.55
qh_9_scaffold_23460
Class: Halobacteria (66.67%)
3 1089 bp 72.54 25.90 100.55
qh_9_scaffold_22900
Species: Halobacterium sp. DL1 (100%)
2 1110 bp 61.89 31.08 100.54
qh_9_scaffold_18028
Species: Haloarcula japonica (50%)
2 1307 bp 67.18 40.86 100.54
qh_9_scaffold_27485
Species: Halorubrum hochstenium (50%)
2 1683 bp 71.84 20.20 100.54
qh_9_scaffold_22295
Species: Halococcus hamelinensis (50%)
2 1131 bp 65.25 7.34 100.53
qh_9_scaffold_22311
Species: Haloarcula argentinensis (50%)
2 1131 bp 64.28 12.11 100.53
qh_9_scaffold_10029
Domain: Bacteria (66.67%)
3 1895 bp 53.14 6.54 100.53
qh_9_scaffold_22145 3 1137 bp 59.89 5.72 100.53
qh_9_scaffold_17600
Species: Halonotius sp. J07HN6 (50%)
4 1328 bp 63.86 10.92 100.53
qh_9_scaffold_6416
Species: Halosimplex carlsbadense (50%)
6 2480 bp 67.74 46.41 100.52
qh_9_scaffold_9876
Species: Haloarcula marismortui (50%)
2 1913 bp 71.62 10.14 100.52
qh_9_scaffold_21720
Species: Natronomonas moolapensis (100%)
2 1152 bp 73.61 23.44 100.52
qh_9_scaffold_21652
Species: Haloquadratum walsbyi (100%)
2 1155 bp 50.74 16.80 100.52
qh_9_scaffold_9706
Species: Haloquadratum walsbyi (50%)
2 1931 bp 64.42 7.25 100.52
qh_9_scaffold_39377
Species: Natronomonas pharaonis (50%)
2 1352 bp 67.31 11.91 100.52
qh_9_scaffold_21004
Species: Natronomonas moolapensis (50%)
2 1179 bp 68.53 8.91 100.51
qh_9_scaffold_15139
Order: Halobacteriales (75%)
4 2755 bp 67.40 11.43 100.51
qh_9_scaffold_20566
Species: Natrialba asiatica (50%)
2 1197 bp 67.34 18.13 100.50
qh_9_scaffold_20487
Species: Salinibacter ruber (50%)
2 1200 bp 62.67 117.00 100.50
qh_9_scaffold_13079 2 1609 bp 49.91 9.70 100.50
qh_9_scaffold_26160
Class: Halobacteria (66.67%)
3 1006 bp 69.98 18.79 100.50
qh_9_scaffold_10773
Species: Haloquadratum sp. J07HQX50 (50%)
2 1812 bp 59.77 5.74 100.50
qh_9_scaffold_20238
Species: Halostagnicola larsenii (100%)
3 1209 bp 67.25 14.23 100.50
qh_9_scaffold_12995
Species: Haloferax elongans (50%)
2 1615 bp 50.59 12.38 100.50
qh_9_scaffold_11400
Genus: Haloarcula (50%)
4 2848 bp 68.29 39.12 100.49
qh_9_scaffold_19885 3 1224 bp 58.50 4.90 100.49
qh_9_scaffold_19886
Species: Halomicrobium mukohataei (50%)
2 1224 bp 74.75 42.73 100.49
qh_9_scaffold_25222 2 1033 bp 62.73 5.32 100.48
qh_9_scaffold_12491
Species: Haloarcula japonica (50%)
2 1654 bp 60.28 19.59 100.48
qh_9_scaffold_14683
Genus: Natronomonas (66.67%)
3 2278 bp 75.02 48.81 100.48
qh_9_scaffold_15694 3 1869 bp 73.57 15.73 100.48
qh_9_scaffold_12274
Species: halophilic archaeon J07HX5 (100%)
4 1672 bp 69.38 7.83 100.48
qh_9_scaffold_24848 3 1045 bp 70.62 8.80 100.48
qh_9_scaffold_24653
Species: Haloferax mucosum (50%)
2 1051 bp 66.79 22.55 100.48
qh_9_scaffold_18979
Class: Halobacteria (66.67%)
3 1263 bp 72.53 66.75 100.48
qh_9_scaffold_35752
Species: Halosimplex carlsbadense (50%)
2 1263 bp 53.68 11.16 100.48
qh_9_scaffold_12071
Domain: Bacteria (66.67%)
3 1690 bp 55.03 5.56 100.47
qh_9_scaffold_18820
Species: Haloarcula japonica (50%)
2 1269 bp 62.73 11.11 100.47
qh_9_scaffold_14805
Species: Haloferax denitrificans (50%)
2 1487 bp 69.33 12.10 100.47
qh_9_scaffold_6101
Species: Natrialba hulunbeirensis (66.67%)
3 2556 bp 52.90 11.74 100.47
qh_9_scaffold_23974
Species: Halosimplex carlsbadense (100%)
2 1072 bp 68.94 21.55 100.47
qh_9_scaffold_18356
Class: Halobacteria (66.67%)
3 1290 bp 68.68 11.71 100.47
qh_9_scaffold_23799
Species: uncultured archaeon A07HB70 (100%)
2 1078 bp 73.01 17.81 100.46
qh_9_scaffold_18243
Species: Halosimplex carlsbadense (50%)
2 1296 bp 69.21 14.35 100.46
qh_9_scaffold_9456
Species: Halomicrobium mukohataei (50%)
2 1962 bp 72.43 12.59 100.46
Displaying items 351-400 of 22383 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.