ggKbase home page

qh_10_scaffold_12459_2

Organism: QH_10_UNK

megabin RP 54 / 55 MC: 52 BSCG 49 / 51 MC: 47 ASCG 38 / 38 MC: 38
Location: 412..1242

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATI5_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 279.0
  • Bit_score: 233
  • Evalue 1.90e-58
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 279.0
  • Bit_score: 233
  • Evalue 5.30e-59
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABG05293.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubro similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 279.0
  • Bit_score: 233
  • Evalue 2.60e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubrobacter xylanophilus → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGCTCGGCGAGGTGTCCCGGGCGGAGGACGTGGTGCAGGACGCGTACCTGCGGTGGGACGACGTTGACCCCGAGACGGTGGACGATCCCGACGCGTACCTGTCGACGATCGTCACCCGGCTGTGTCTCGACGAATTGACCTCGGCCCGAGCCGAACGCGAGGAGTACACCGGCCCCTGGCTCCCGGAGCCGGTGGTGGCGGAGGGGGCTCGTCCCGACGCCGAGATTGAGGAAACGAGCGAGCTCTCGATGGCGCTGCTGGTGCTGCTCGATGAGCTTCGCCCCATCGAGCGGGCCGTGTACGTCCTCCGCAAGGCGTTCGACCGCCCGTACGCCGAGATCGCTCGGCATGTGGACCGGACGGAGGCGCACTGCCGCAAGATTGCGCAGCGGACCCGCACCCGCATCGACGCGAATGGGAACTCTATCGATGCGCCCCCCGCCGCTCACGCCGAGCTGCTGACCCAGTTTGTGGACGCGCTGGAGGCCCGCGATCCCGAGGCCCTGACCGAGGTGCTCGCTGAGGACGTGACGCACCTCACCGACGGCGGCGAGGTAAAAGAGGCGGCCAAGCGGCCCATCGAGGGTGCCGAGCGGGTGCAACGCTTCCTCCTCAGCATTTCCGAGAAGACCGGCGACGACCTTCGCGTTCGACCGGCCTACGTCAACGGCCGACCCGGCCTGCTCGCGGTCCAGGACGACCGCGTGCACAGCGTCTGGGGCCTCCGCGTCGTCAACGGACAGATCCAGGAGCTCTATTGCGTGCGAAACCCCGAGAAGCTCCGCCACCTCGATCGGTCGACCATCGACGAACGAGAGCGCACGCATTGA
PROTEIN sequence
Length: 277
MLGEVSRAEDVVQDAYLRWDDVDPETVDDPDAYLSTIVTRLCLDELTSARAEREEYTGPWLPEPVVAEGARPDAEIEETSELSMALLVLLDELRPIERAVYVLRKAFDRPYAEIARHVDRTEAHCRKIAQRTRTRIDANGNSIDAPPAAHAELLTQFVDALEARDPEALTEVLAEDVTHLTDGGEVKEAAKRPIEGAERVQRFLLSISEKTGDDLRVRPAYVNGRPGLLAVQDDRVHSVWGLRVVNGQIQELYCVRNPEKLRHLDRSTIDERERTH*