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QH_10_UNK

In projects: QH_10

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 20.81 Longest contig: 99.48 Kbp Bin length: 62.59 Mbp GC content: 61.29 %
Contigs count: 23910 Features count: 79125 rRNAs count: 20 tRNAs count: 0

Genome completeness

megabin RP 54 / 55 MC: 52 BSCG 49 / 51 MC: 47 ASCG 38 / 38 MC: 38
Displaying items 251-300 of 23910 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_10_scaffold_23082
Species: Natronomonas pharaonis (100%)
3 1222 bp 73.73 16.61 100.90
qh_10_scaffold_20658
Order: Natrialbales (66.67%)
3 1338 bp 64.28 63.38 100.90
qh_10_scaffold_16946
Species: Halalkalicoccus jeotgali (50%)
2 1561 bp 66.94 39.46 100.90
qh_10_scaffold_22959
Species: Hyphomicrobium denitrificans (50%)
2 1787 bp 41.58 7.33 100.90
qh_10_scaffold_15876
Species: Natronomonas moolapensis (50%)
6 1909 bp 68.36 61.08 100.89
qh_10_scaffold_12888
Order: Halobacteriales (66.67%)
3 2697 bp 70.75 26.40 100.89
qh_10_scaffold_22663 3 1240 bp 62.74 8.47 100.89
qh_10_scaffold_20194
Species: Stanieria cyanosphaera (50%)
2 1362 bp 58.22 9.25 100.88
qh_10_scaffold_19827
Species: Haloarcula californiae (66.67%)
3 1380 bp 53.62 31.52 100.87
qh_10_scaffold_24481
Species: Halarchaeum acidiphilum (50%)
2 1160 bp 51.72 7.07 100.86
qh_10_scaffold_27173 3 1062 bp 58.19 8.19 100.85
qh_10_scaffold_23771 2 1190 bp 48.66 7.90 100.84
qh_10_scaffold_17113
Species: Halomicrobium mukohataei (50%)
2 1550 bp 68.13 38.77 100.84
qh_10_scaffold_26467 5 1678 bp 49.23 5.96 100.83
qh_10_scaffold_30061
Species: halophilic archaeon J07HX64 (66.67%)
3 1711 bp 66.69 8.83 100.82
qh_10_scaffold_22793 2 1235 bp 31.09 5.26 100.81
qh_10_scaffold_14696
Species: GWF2_Bacteroidetes_35_48_curated (100%)
2 1732 bp 56.06 11.20 100.81
qh_10_scaffold_22459
Species: Haloferax elongans (50%)
2 1250 bp 65.36 47.20 100.80
qh_10_scaffold_20502
Species: Halalkalicoccus jeotgali (50%)
2 1899 bp 74.20 13.48 100.79
qh_10_scaffold_28625
Species: Desulfurivibrio alkaliphilus (50%)
2 1018 bp 62.67 15.62 100.79
qh_10_scaffold_10764
Species: Salinibacter ruber (66.67%)
3 2935 bp 67.70 13.66 100.78
qh_10_scaffold_24759
Species: Haloarcula hispanica (50%)
2 1149 bp 56.22 15.40 100.78
qh_10_scaffold_13937
Species: Halogeometricum pallidum (50%)
2 1798 bp 75.81 49.67 100.78
qh_10_scaffold_14730 7 2316 bp 48.62 17.49 100.78
qh_10_scaffold_11540
Species: Natronomonas moolapensis (66.67%)
3 2703 bp 70.18 45.95 100.78
qh_10_scaffold_21313
Species: Natronomonas pharaonis (75%)
4 1304 bp 65.64 19.56 100.77
qh_10_scaffold_11212
Species: GWF2_Bacteroidetes_35_48_curated (66.67%)
3 2099 bp 60.84 11.43 100.76
qh_10_scaffold_15014
Domain: Bacteria (66.67%)
3 1709 bp 60.80 9.65 100.76
qh_10_scaffold_45878
Species: Candidatus Halobonum tyrrellensis (100%)
2 1188 bp 70.54 7.66 100.76
qh_10_scaffold_14764 3 1727 bp 59.24 18.01 100.75
qh_10_scaffold_24083
Species: Bacillus nealsonii (50%)
2 2016 bp 41.27 6.89 100.74
qh_10_scaffold_26608
Domain: Archaea (66.67%)
3 1081 bp 66.51 8.79 100.74
qh_10_scaffold_12860
Species: Salinibacter ruber (100%)
2 1909 bp 65.53 9.74 100.73
qh_10_scaffold_44990
Species: Salinibacter ruber (100%)
2 1093 bp 67.25 16.65 100.73
qh_10_scaffold_22683 4 1239 bp 66.26 16.95 100.73
qh_10_scaffold_44435
Species: Halosimplex carlsbadense (50%)
2 1656 bp 71.38 38.22 100.73
qh_10_scaffold_26760
Species: Halococcus thailandensis (50%)
2 1522 bp 68.07 10.78 100.72
qh_10_scaffold_12555
Species: Halosimplex carlsbadense (100%)
2 1939 bp 69.37 20.01 100.72
qh_10_scaffold_33654
Class: Halobacteria (66.67%)
3 1385 bp 70.32 33.57 100.72
qh_10_scaffold_22370
Class: Halobacteria (66.67%)
3 1254 bp 63.24 14.51 100.72
qh_10_scaffold_25415
Order: Halobacteriales (80%)
5 2517 bp 71.08 47.04 100.72
qh_10_scaffold_19326 3 1409 bp 50.89 6.96 100.71
qh_10_scaffold_12064
Species: Natrialba magadii (66.67%)
3 1993 bp 57.95 29.65 100.70
qh_10_scaffold_24882 3 1144 bp 61.36 7.34 100.70
qh_10_scaffold_25208
Species: Haloferax sp. Arc-Hr (100%)
2 1877 bp 56.21 11.61 100.69
qh_10_scaffold_24417
Species: Natronomonas pharaonis (50%)
2 1162 bp 70.83 16.09 100.69
qh_10_scaffold_25437
Order: Halobacteriales (66.67%)
3 2059 bp 68.92 45.26 100.68
qh_10_scaffold_11407
Order: Halobacteriales (100%)
4 2071 bp 66.83 16.27 100.68
qh_10_scaffold_23731
Species: RBG_13_Planctomycetes_50_24_curated (50%)
2 1192 bp 68.04 6.96 100.67
qh_10_scaffold_23597
Species: Natronomonas moolapensis (50%)
2 1198 bp 74.37 38.73 100.67
Displaying items 251-300 of 23910 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.