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QH_10_UNK

In projects: QH_10

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 20.81 Longest contig: 99.48 Kbp Bin length: 62.59 Mbp GC content: 61.29 %
Contigs count: 23910 Features count: 79125 rRNAs count: 20 tRNAs count: 0

Genome completeness

megabin RP 54 / 55 MC: 52 BSCG 49 / 51 MC: 47 ASCG 38 / 38 MC: 38
Displaying items 201-250 of 23910 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_10_scaffold_23243
Species: Natronorubrum tibetense (66.67%)
3 2006 bp 50.20 4.34 100.50
qh_10_scaffold_26514 2 1084 bp 49.35 4.34 78.04
qh_10_scaffold_27269 2 1059 bp 37.68 4.34 89.52
qh_10_scaffold_24098 4 1176 bp 37.24 4.34 96.94
qh_10_scaffold_35010
Species: Natrialba asiatica (50%)
2 1683 bp 48.60 4.34 74.69
qh_10_scaffold_28759
Species: Halovivax ruber (50%)
2 1014 bp 46.15 4.34 100.00
qh_10_scaffold_28760
Domain: Bacteria (66.67%)
3 1013 bp 48.77 4.34 88.55
qh_10_scaffold_27299
Species: Actibacterium mucosum (50%)
2 1058 bp 51.32 4.35 87.05
qh_10_scaffold_21672
Species: Dactylococcopsis salina (100%)
2 1286 bp 36.86 4.35 90.28
qh_10_scaffold_17255
Species: Mastigocladus laminosus (50%)
2 1540 bp 43.18 4.35 99.16
qh_10_scaffold_26079 1 1100 bp 47.55 4.36 20.73
qh_10_scaffold_22191
Species: Halanaeroarchaeum sulfurireducens (50%)
2 1262 bp 41.44 4.36 87.24
qh_10_scaffold_21791
Species: Halococcus saccharolyticus (66.67%)
3 1281 bp 45.43 4.37 93.21
qh_10_scaffold_26762
Species: GWA2_OD1_56_11 (50%)
2 1075 bp 39.91 4.37 99.07
qh_10_scaffold_26120 3 1098 bp 38.16 4.37 88.52
qh_10_scaffold_21343
Species: Bacteroides oleiciplenus (50%)
2 1303 bp 39.45 4.37 86.80
qh_10_scaffold_22812 2 1233 bp 39.74 4.38 79.08
qh_10_scaffold_36954
Species: Clostridium ultunense (50%)
2 1324 bp 40.33 4.38 97.21
qh_10_scaffold_26161
Species: R_RIF_OD1_13_49_12 (50%)
2 1096 bp 42.06 4.38 84.85
qh_10_scaffold_29032
Species: R_OD1_Magasanikbacteria_47_16 (100%)
1 1004 bp 40.04 4.38 99.80
qh_10_scaffold_25543
Species: GWB2_Planctomycetes_41_19_curated (50%)
2 1120 bp 57.14 4.38 44.20
qh_10_scaffold_25010
Species: Isosphaera pallida (50%)
2 1140 bp 53.95 4.39 91.58
qh_10_scaffold_11386
Species: Rhodothermus marinus (50%)
2 2075 bp 54.60 4.39 56.67
qh_10_scaffold_19278 4 1412 bp 49.36 4.39 69.26
qh_10_scaffold_7418
Domain: Bacteria (66.67%)
3 2750 bp 34.73 4.40 99.49
qh_10_scaffold_26999 2 1067 bp 42.83 4.40 39.08
qh_10_scaffold_50409
Species: Halorubrum sp. AJ67 (50%)
2 1136 bp 45.95 4.40 90.32
qh_10_scaffold_29189
Species: Candidatus Nanosalina sp. J07AB43 (50%)
2 1000 bp 43.50 4.40 90.90
qh_10_scaffold_20600
Species: R_OD1_Magasanikbacteria_47_16 (50%)
2 1341 bp 41.83 4.40 95.75
qh_10_scaffold_17535 3 1522 bp 34.49 4.40 100.13
qh_10_scaffold_11112 3 2113 bp 44.77 4.40 98.39
qh_10_scaffold_20173
Species: Aeromonas diversa (50%)
2 1363 bp 50.99 4.40 91.78
qh_10_scaffold_18265
Species: R_OD1_Yanofskybacteria_41_11 (50%)
2 1476 bp 42.68 4.40 91.67
qh_10_scaffold_26253
Species: Halosimplex carlsbadense (50%)
2 1092 bp 63.74 4.40 87.36
qh_10_scaffold_26348 1 1089 bp 47.38 4.41 96.69
qh_10_scaffold_15664
Species: Candidatus Kuenenia stuttgartiensis (50%)
2 1657 bp 34.16 4.41 86.90
qh_10_scaffold_25741 2 1112 bp 35.61 4.41 95.77
qh_10_scaffold_29823 3 1584 bp 39.52 4.42 65.53
qh_10_scaffold_46860 3 1087 bp 46.55 4.42 99.91
qh_10_scaffold_17276 2 1539 bp 45.55 4.42 74.07
qh_10_scaffold_17644 2 1514 bp 51.06 4.43 82.23
qh_10_scaffold_14689
Domain: Bacteria (66.67%)
3 1733 bp 53.89 4.44 97.98
qh_10_scaffold_38932
Domain: Bacteria (66.67%)
3 1440 bp 52.85 4.44 97.92
qh_10_scaffold_28028
Species: Firmicutes bacterium CAG:534 (50%)
2 1035 bp 47.25 4.44 99.71
qh_10_scaffold_14473
Species: Rhodothermus marinus (50%)
4 2654 bp 36.36 4.45 77.54
qh_10_scaffold_18217 3 1479 bp 35.50 4.46 89.86
qh_10_scaffold_10638
Species: Halobiforma lacisalsi (100%)
1 2174 bp 47.79 4.46 72.31
qh_10_scaffold_15985 5 2625 bp 32.95 4.46 72.57
qh_10_scaffold_46389 2 1252 bp 33.95 4.47 49.84
qh_10_scaffold_20997 2 1319 bp 43.52 4.47 100.08
Displaying items 201-250 of 23910 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.