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QH_11_UNK

In projects: QH_11

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.64 Longest contig: 134.36 Kbp Bin length: 104.22 Mbp GC content: 62.13 %
Contigs count: 31177 Features count: 126136 rRNAs count: 22 tRNAs count: 1281

Genome completeness

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Displaying items 251-300 of 31177 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_11_scaffold_11532 4 2056 bp 50.34 4.33 75.88
qh_11_scaffold_19630
Species: Haloarcula sinaiiensis (100%)
2 2172 bp 45.35 4.33 90.33
qh_11_scaffold_27284 2 1059 bp 37.68 4.34 89.52
qh_11_scaffold_14177
Species: GWA2_OD1_37_8 (50%)
2 1775 bp 36.45 4.34 96.85
qh_11_scaffold_24093 4 1176 bp 37.24 4.34 96.94
qh_11_scaffold_35018
Species: Natrialba asiatica (50%)
2 1683 bp 48.60 4.34 74.69
qh_11_scaffold_28744
Species: Halovivax ruber (50%)
2 1014 bp 46.15 4.34 100.00
qh_11_scaffold_23228
Species: Natronorubrum tibetense (66.67%)
3 2006 bp 50.20 4.34 100.50
qh_11_scaffold_28770
Domain: Bacteria (66.67%)
3 1013 bp 48.77 4.34 88.55
qh_11_scaffold_26512 2 1084 bp 49.35 4.34 78.04
qh_11_scaffold_27293
Species: Actibacterium mucosum (50%)
2 1058 bp 51.32 4.35 87.05
qh_11_scaffold_17245
Species: Mastigocladus laminosus (50%)
2 1540 bp 43.18 4.35 99.16
qh_11_scaffold_21668
Species: Dactylococcopsis salina (100%)
2 1286 bp 36.86 4.35 90.28
qh_11_scaffold_22184
Species: Halanaeroarchaeum sulfurireducens (50%)
2 1262 bp 41.44 4.36 87.24
qh_11_scaffold_7866
Class: Magasanikbacteria (57.14%)
7 3255 bp 30.69 4.36 96.13
qh_11_scaffold_26060 1 1100 bp 47.55 4.36 20.73
qh_11_scaffold_26121 3 1098 bp 38.16 4.37 88.52
qh_11_scaffold_21306
Species: Bacteroides oleiciplenus (50%)
2 1303 bp 39.45 4.37 86.80
qh_11_scaffold_21768
Species: Halococcus saccharolyticus (66.67%)
3 1281 bp 45.43 4.37 93.21
qh_11_scaffold_15598
Phylum: Parcubacteria (100%)
4 2446 bp 46.28 4.37 66.84
qh_11_scaffold_26777
Species: GWA2_OD1_56_11 (50%)
2 1075 bp 39.91 4.37 99.07
qh_11_scaffold_15493
Species: GWC2_OD1_42_27 (50%)
2 1671 bp 37.34 4.37 87.43
qh_11_scaffold_36960
Species: Clostridium ultunense (50%)
2 1324 bp 40.33 4.38 97.21
qh_11_scaffold_26156
Species: R_RIF_OD1_13_49_12 (50%)
2 1096 bp 42.06 4.38 84.85
qh_11_scaffold_25517
Species: GWB2_Planctomycetes_41_19_curated (50%)
2 1120 bp 57.14 4.38 44.20
qh_11_scaffold_22800 2 1233 bp 39.74 4.38 79.08
qh_11_scaffold_29041
Species: R_OD1_Magasanikbacteria_47_16 (100%)
1 1004 bp 40.04 4.38 99.80
qh_11_scaffold_25664
Species: RHI_RIF_OD1_10_43_12b (50%)
4 1846 bp 47.02 4.39 84.99
qh_11_scaffold_11389
Species: Rhodothermus marinus (50%)
2 2075 bp 54.60 4.39 56.67
qh_11_scaffold_19245 4 1412 bp 49.36 4.39 69.26
qh_11_scaffold_25018
Species: Isosphaera pallida (50%)
2 1140 bp 53.95 4.39 91.58
qh_11_scaffold_16212
Species: R_OD1_Magasanikbacteria_41_13 (50%)
2 1613 bp 34.47 4.40 84.81
qh_11_scaffold_20140
Species: Aeromonas diversa (50%)
2 1363 bp 50.99 4.40 91.78
qh_11_scaffold_50336
Species: Halorubrum sp. AJ67 (50%)
2 1136 bp 45.95 4.40 90.32
qh_11_scaffold_29180
Species: Candidatus Nanosalina sp. J07AB43 (50%)
2 1000 bp 43.50 4.40 90.90
qh_11_scaffold_7413
Domain: Bacteria (66.67%)
3 2750 bp 34.73 4.40 99.49
qh_11_scaffold_17506 3 1522 bp 34.49 4.40 100.13
qh_11_scaffold_18237
Species: R_OD1_Yanofskybacteria_41_11 (50%)
2 1476 bp 42.68 4.40 91.67
qh_11_scaffold_11108 3 2113 bp 44.77 4.40 98.39
qh_11_scaffold_27015 2 1067 bp 42.83 4.40 39.08
qh_11_scaffold_20565
Species: R_OD1_Magasanikbacteria_47_16 (50%)
2 1341 bp 41.83 4.40 95.75
qh_11_scaffold_26373 1 1089 bp 47.38 4.41 96.69
qh_11_scaffold_19484
Class: Magasanikbacteria (50%)
4 1971 bp 32.93 4.41 101.07
qh_11_scaffold_20645
Species: GWC2_OD1_34_16_partial (50%)
2 1337 bp 30.22 4.41 86.61
qh_11_scaffold_25745 2 1112 bp 35.61 4.41 95.77
qh_11_scaffold_15653
Species: Candidatus Kuenenia stuttgartiensis (50%)
2 1657 bp 34.16 4.41 86.90
qh_11_scaffold_29821 3 1584 bp 39.52 4.42 65.53
qh_11_scaffold_46763 3 1087 bp 46.55 4.42 99.91
qh_11_scaffold_17254 2 1539 bp 45.55 4.42 74.07
qh_11_scaffold_23118
Species: R_OD1_Magasanikbacteria_47_14 (100%)
1 1220 bp 36.31 4.43 99.84
Displaying items 251-300 of 31177 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.