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QS_1_UNK

In projects: QS_1  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.56 Longest contig: 171.49 Kbp Bin length: 82.52 Mbp GC content: 62.60 %
Contigs count: 28378 Features count: 107284 rRNAs count: 14 tRNAs count: 997

Genome completeness

megabin RP 48 / 55 MC: 44 BSCG 43 / 51 MC: 36 ASCG 38 / 38 MC: 38
Displaying items 551-600 of 28378 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_1_scaffold_21908
Species: Halarchaeum acidiphilum (50%)
2 1391 bp 70.81 31.92 100.29
qs_1_scaffold_37295
Species: uncultured archaeon A07HR60 (66.67%)
3 1394 bp 67.79 16.14 100.29
qs_1_scaffold_30586
Species: Cyanothece sp. PCC 7425 (50%)
2 1047 bp 57.02 7.35 100.29
qs_1_scaffold_30403
Order: Halobacteriales (66.67%)
3 1053 bp 62.49 7.41 100.29
qs_1_scaffold_16307
Order: Halobacteriales (66.67%)
3 1768 bp 72.12 9.90 100.28
qs_1_scaffold_34624
Order: Halobacteriales (50%)
4 1415 bp 73.22 9.61 100.28
qs_1_scaffold_21441
Species: Natrinema pellirubrum (50%)
2 1415 bp 67.42 39.43 100.28
qs_1_scaffold_21326
Species: Candidatus Halobonum tyrrellensis (50%)
4 1421 bp 69.46 10.70 100.28
qs_1_scaffold_23175
Species: Rhodothermus marinus (66.67%)
3 2136 bp 70.65 8.80 100.28
qs_1_scaffold_29915
Species: Halococcus salifodinae (50%)
2 1068 bp 68.35 10.11 100.28
qs_1_scaffold_29920
Species: Halorubrum lipolyticum (50%)
2 1068 bp 71.16 6.74 100.28
qs_1_scaffold_29923 3 1068 bp 63.76 7.12 100.28
qs_1_scaffold_29924
Species: Halomicrobium mukohataei (50%)
2 1068 bp 71.07 9.36 100.28
qs_1_scaffold_29836
Species: Haloterrigena salina (50%)
2 1071 bp 73.11 9.15 100.28
qs_1_scaffold_27416
Domain: Bacteria (100%)
3 2504 bp 64.30 22.80 100.28
qs_1_scaffold_29728
Species: Halosimplex carlsbadense (100%)
2 1074 bp 72.81 12.48 100.28
qs_1_scaffold_31720
Class: Oscillatoriophycideae (66.67%)
3 1801 bp 47.75 7.16 100.28
qs_1_scaffold_29443
Species: Natronomonas pharaonis (100%)
2 1083 bp 68.42 13.67 100.28
qs_1_scaffold_20861
Species: Halococcus salifodinae (50%)
2 1448 bp 68.92 24.86 100.28
qs_1_scaffold_12339
Species: Halobiforma lacisalsi (50%)
2 2190 bp 61.46 7.58 100.27
qs_1_scaffold_29050
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1095 bp 60.73 6.67 100.27
qs_1_scaffold_28957
Species: Natronomonas pharaonis (100%)
2 1098 bp 72.31 14.94 100.27
qs_1_scaffold_20544
Species: Halorubrum lacusprofundi (50%)
2 1466 bp 67.94 19.65 100.27
qs_1_scaffold_15563
Species: Haloferax larsenii (50%)
2 1834 bp 65.21 17.01 100.27
qs_1_scaffold_15536
Species: Natronomonas moolapensis (66.67%)
3 1837 bp 68.48 25.26 100.27
qs_1_scaffold_28670
Species: Haloferax elongans (100%)
2 1107 bp 57.63 37.22 100.27
qs_1_scaffold_20344 3 1478 bp 70.84 9.88 100.27
qs_1_scaffold_20226
Species: uncultured archaeon A07HR67 (50%)
2 1484 bp 74.53 11.79 100.27
qs_1_scaffold_28526
Species: Runella slithyformis (50%)
2 1113 bp 50.94 6.29 100.27
qs_1_scaffold_20196
Species: Halococcus saccharolyticus (100%)
2 1487 bp 58.64 26.77 100.27
qs_1_scaffold_28340
Order: Natrialbales (66.67%)
3 1119 bp 68.01 10.99 100.27
qs_1_scaffold_28243
Order: Halobacteriales (66.67%)
3 1122 bp 69.61 11.76 100.27
qs_1_scaffold_19914
Species: Halobiforma lacisalsi (50%)
2 1505 bp 65.51 8.44 100.27
qs_1_scaffold_27537
Species: Halogeometricum pallidum (50%)
2 1146 bp 71.99 8.29 100.26
qs_1_scaffold_14728
Species: Halosimplex carlsbadense (100%)
3 1915 bp 72.22 19.01 100.26
qs_1_scaffold_27346
Species: Halococcus morrhuae (50%)
2 1152 bp 70.66 78.65 100.26
qs_1_scaffold_19249
Species: Halarchaeum acidiphilum (50%)
2 1547 bp 55.01 6.59 100.26
qs_1_scaffold_27103
Species: Candidatus Halobonum tyrrellensis (100%)
2 1161 bp 73.64 12.06 100.26
qs_1_scaffold_19066
Species: Natronomonas moolapensis (50%)
2 1559 bp 67.16 15.97 100.26
qs_1_scaffold_51530 2 1170 bp 69.15 6.32 100.26
qs_1_scaffold_26580
Species: Haloarcula vallismortis (50%)
2 1182 bp 73.18 8.71 100.25
qs_1_scaffold_26497
Species: Halococcus saccharolyticus (100%)
2 1185 bp 61.69 28.61 100.25
qs_1_scaffold_4594
Species: Halococcus thailandensis (100%)
4 4348 bp 57.20 15.00 100.25
qs_1_scaffold_26416
Species: Haladaptatus paucihalophilus (50%)
2 1188 bp 68.10 11.11 100.25
qs_1_scaffold_26352
Species: Haloterrigena turkmenica (50%)
2 1191 bp 71.20 8.31 100.25
qs_1_scaffold_26293
Species: Natronomonas pharaonis (100%)
2 1194 bp 69.93 32.66 100.25
qs_1_scaffold_26163
Species: Natrinema sp. J7-2 (50%)
2 1200 bp 64.17 42.00 100.25
qs_1_scaffold_8744
Species: Halorubrum litoreum (50%)
2 2813 bp 64.27 19.34 100.25
qs_1_scaffold_25885
Species: halophilic archaeon J07HX64 (100%)
2 1209 bp 68.65 8.93 100.25
qs_1_scaffold_25914
Species: Halopiger xanaduensis (50%)
2 1209 bp 46.15 9.43 100.25
Displaying items 551-600 of 28378 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.