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QS_1_UNK

In projects: QS_1  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.56 Longest contig: 171.49 Kbp Bin length: 82.52 Mbp GC content: 62.60 %
Contigs count: 28378 Features count: 107284 rRNAs count: 14 tRNAs count: 997

Genome completeness

megabin RP 48 / 55 MC: 44 BSCG 43 / 51 MC: 36 ASCG 38 / 38 MC: 38
Displaying items 28051-28100 of 28378 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_1_scaffold_24803
Species: Natronomonas pharaonis (50%)
2 1254 bp 68.90 27.91 100.72
qs_1_scaffold_15831
Species: CG_Omnitr_02 (50%)
2 1811 bp 60.35 7.12 100.72
qs_1_scaffold_15868 5 1808 bp 62.83 6.97 100.72
qs_1_scaffold_22288
Species: Halomicrobium mukohataei (100%)
3 1370 bp 66.57 8.32 100.73
qs_1_scaffold_22513
Species: Halosimplex carlsbadense (100%)
2 1358 bp 68.63 14.06 100.74
qs_1_scaffold_34801
Order: Halobacteriales (66.67%)
3 1492 bp 57.10 7.44 100.74
qs_1_scaffold_29395 2 1084 bp 49.54 4.70 100.74
qs_1_scaffold_29713
Species: Halosimplex carlsbadense (100%)
3 1075 bp 72.37 17.67 100.74
qs_1_scaffold_8757
Domain: Bacteria (66.67%)
3 2811 bp 67.73 10.35 100.75
qs_1_scaffold_26071
Phylum: Firmicutes (66.67%)
3 1203 bp 53.12 5.74 100.75
qs_1_scaffold_3972
Class: Halobacteria (55.56%)
9 5729 bp 64.06 12.43 100.75
qs_1_scaffold_20915
Species: Halorubrum aidingense (50%)
2 1444 bp 70.01 8.66 100.76
qs_1_scaffold_4641
Species: Natrinema pellirubrum (50%)
4 4317 bp 59.46 11.65 100.76
qs_1_scaffold_16704
Species: Halopiger xanaduensis (80%)
5 2215 bp 63.52 8.44 100.77
qs_1_scaffold_30764 2 1042 bp 67.18 5.76 100.77
qs_1_scaffold_31285
Species: Natronomonas moolapensis (100%)
2 1027 bp 74.78 26.19 100.78
qs_1_scaffold_31289 3 1027 bp 66.70 8.47 100.78
qs_1_scaffold_27287
Species: Candidatus Halobonum tyrrellensis (50%)
2 1155 bp 72.29 14.29 100.78
qs_1_scaffold_9339
Species: Salinibacter ruber (75%)
4 2691 bp 63.06 13.86 100.78
qs_1_scaffold_31394
Species: Halogeometricum pallidum (50%)
2 1024 bp 70.41 7.13 100.78
qs_1_scaffold_21823
Species: Haloterrigena salina (50%)
2 1396 bp 68.70 71.85 100.79
qs_1_scaffold_31835
Species: Natronomonas pharaonis (50%)
2 1012 bp 70.26 9.88 100.79
qs_1_scaffold_25454
Class: Halobacteria (50%)
4 2015 bp 56.53 5.21 100.79
qs_1_scaffold_32067 2 1006 bp 51.09 3.98 100.79
qs_1_scaffold_24963
Species: halophilic archaeon DL31 (100%)
2 1247 bp 72.25 6.26 100.80
qs_1_scaffold_25025
Species: Haloferax sp. ATCC BAA-645 (50%)
2 1244 bp 70.10 9.24 100.80
qs_1_scaffold_18559
Species: Halomicrobium mukohataei (50%)
2 1595 bp 67.34 8.09 100.82
qs_1_scaffold_25615
Order: Natrialbales (66.67%)
3 1220 bp 66.23 6.23 100.82
qs_1_scaffold_20712
Species: Halococcus thailandensis (100%)
3 1455 bp 58.76 16.77 100.83
qs_1_scaffold_11945
Species: Candidatus Desulforudis audaxviator (75%)
4 3002 bp 64.56 9.73 100.83
qs_1_scaffold_19210
Species: Halorubrum kocurii (50%)
2 1550 bp 71.61 10.84 100.84
qs_1_scaffold_29827
Species: Halococcus saccharolyticus (50%)
2 1071 bp 68.35 11.30 100.84
qs_1_scaffold_21248
Phylum: Cyanobacteria (66.67%)
3 1425 bp 71.37 35.23 100.84
qs_1_scaffold_29914
Species: Caldilinea aerophila (50%)
2 1068 bp 57.77 4.49 100.84
qs_1_scaffold_16493
Genus: Natronomonas (66.67%)
3 1752 bp 75.91 41.89 100.86
qs_1_scaffold_34576
Species: Halomicrobium mukohataei (100%)
3 1517 bp 64.14 8.11 100.86
qs_1_scaffold_17982
Species: Halosimplex carlsbadense (50%)
2 1633 bp 66.01 7.72 100.86
qs_1_scaffold_21933 4 1389 bp 69.62 7.06 100.86
qs_1_scaffold_31008
Species: RBG_16_Actinobacteria_68_12_curated (50%)
2 1035 bp 60.10 4.64 100.87
qs_1_scaffold_22219
Species: Haloarcula argentinensis (100%)
2 1374 bp 59.83 12.95 100.87
qs_1_scaffold_22502
Domain: Bacteria (66.67%)
3 1359 bp 71.38 21.93 100.88
qs_1_scaffold_28004
Order: Halobacteriales (66.67%)
3 1130 bp 67.08 19.12 100.89
qs_1_scaffold_12773 5 2141 bp 68.33 18.50 100.89
qs_1_scaffold_24263
Genus: Haloarcula (60%)
5 2450 bp 62.16 7.92 100.90
qs_1_scaffold_20256
Order: Flavobacteriales (66.67%)
3 2783 bp 56.74 113.34 100.90
qs_1_scaffold_14097
Genus: Halorubrum (50%)
4 1983 bp 74.28 16.09 100.91
qs_1_scaffold_25246
Order: Halobacteriales (100%)
3 1971 bp 71.89 8.42 100.91
qs_1_scaffold_23437
Species: Halococcus morrhuae (100%)
2 1314 bp 62.71 16.89 100.91
qs_1_scaffold_56376
Class: Halobacteria (66.67%)
3 1085 bp 62.86 12.26 100.92
qs_1_scaffold_26486 4 1186 bp 64.67 24.11 100.93
Displaying items 28051-28100 of 28378 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.