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QS_1_UNK

In projects: QS_1  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.56 Longest contig: 171.49 Kbp Bin length: 82.52 Mbp GC content: 62.60 %
Contigs count: 28378 Features count: 107284 rRNAs count: 14 tRNAs count: 997

Genome completeness

megabin RP 48 / 55 MC: 44 BSCG 43 / 51 MC: 36 ASCG 38 / 38 MC: 38
Displaying items 251-300 of 28378 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_1_scaffold_25316
Species: Halobacterium sp. DL1 (50%)
2 1232 bp 56.25 4.55 88.15
qs_1_scaffold_31867
Species: Rhodothermus marinus (50%)
2 1011 bp 55.00 4.55 91.69
qs_1_scaffold_28892
Species: Halopiger xanaduensis (50%)
2 1100 bp 52.91 4.55 101.73
qs_1_scaffold_21662 2 1404 bp 45.94 4.56 95.73
qs_1_scaffold_18456
Species: Halogranum salarium (50%)
2 1602 bp 53.25 4.56 95.51
qs_1_scaffold_18468
Species: Sphaerobacter thermophilus (50%)
2 1601 bp 51.09 4.56 96.69
qs_1_scaffold_44960
Species: Thermococcus paralvinellae (50%)
2 2107 bp 42.62 4.56 46.99
qs_1_scaffold_55209
Species: Chroococcales cyanobacterium CENA595 (100%)
1 1268 bp 47.56 4.57 24.84
qs_1_scaffold_20937
Species: Halorhabdus tiamatea (50%)
2 1443 bp 50.38 4.57 85.03
qs_1_scaffold_32025
Species: Salinibacter ruber (100%)
2 1007 bp 64.15 4.57 98.61
qs_1_scaffold_26054
Species: Pontibacillus chungwhensis (50%)
2 1203 bp 48.38 4.57 67.83
qs_1_scaffold_26562 1 1182 bp 47.04 4.57 99.75
qs_1_scaffold_15760 4 1817 bp 57.51 4.57 71.33
qs_1_scaffold_28443
Species: Parabacteroides sp. 20_3 (100%)
1 1115 bp 37.76 4.57 86.64
qs_1_scaffold_32137 3 1004 bp 51.59 4.58 99.00
qs_1_scaffold_32139
Species: Halogranum salarium (50%)
2 1004 bp 62.55 4.58 100.10
qs_1_scaffold_28505
Species: Salinibacter ruber (100%)
1 1113 bp 55.17 4.58 48.79
qs_1_scaffold_17913
Species: Pyrococcus abyssi (100%)
1 1639 bp 46.43 4.58 89.51
qs_1_scaffold_30961 4 1899 bp 52.29 4.58 100.00
qs_1_scaffold_34653
Species: Haloarcula japonica (66.67%)
3 1589 bp 58.53 4.59 98.36
qs_1_scaffold_11651
Order: Natrialbales (66.67%)
3 2287 bp 48.58 4.59 76.34
qs_1_scaffold_15399
Species: Treponema azotonutricium (50%)
2 1851 bp 36.68 4.59 86.39
qs_1_scaffold_30619
Species: Halogeometricum borinquense (100%)
1 1046 bp 48.18 4.59 99.81
qs_1_scaffold_19583
Species: CG_CPR01_01 (50%)
2 1525 bp 49.51 4.59 100.52
qs_1_scaffold_31388
Species: Fibrella aestuarina (100%)
1 1024 bp 40.92 4.59 74.41
qs_1_scaffold_40596
Class: Oscillatoriophycideae (66.67%)
3 1392 bp 65.16 4.60 101.72
qs_1_scaffold_26762
Species: Natronococcus amylolyticus (50%)
2 1175 bp 58.55 4.60 87.32
qs_1_scaffold_16640
Species: Haloferax elongans (50%)
2 1740 bp 51.61 4.60 78.62
qs_1_scaffold_30715
Species: Natrinema gari (50%)
2 1043 bp 41.61 4.60 99.52
qs_1_scaffold_21554
Genus: Halococcus (50%)
4 1410 bp 50.21 4.61 79.36
qs_1_scaffold_45286
Species: R_OP11_Roizmanbacteria_41_22 (50%)
2 1410 bp 48.51 4.61 67.87
qs_1_scaffold_28048 1 1129 bp 46.06 4.61 99.91
qs_1_scaffold_28062
Species: Salinibacter ruber (50%)
2 1128 bp 58.69 4.61 79.52
qs_1_scaffold_22327
Species: Halorubrum aidingense (50%)
2 1367 bp 51.13 4.61 79.66
qs_1_scaffold_26320
Species: Haloarcula hispanica (50%)
2 1193 bp 60.94 4.61 56.33
qs_1_scaffold_51946
Species: GWF2_Lentisphaerae_57_35_curated (50%)
2 1212 bp 46.53 4.62 101.24
qs_1_scaffold_28763
Species: R_WWE3_42_13 (50%)
2 1104 bp 55.80 4.62 91.03
qs_1_scaffold_30865
Species: Halorhabdus tiamatea (100%)
1 1039 bp 50.82 4.62 99.62
qs_1_scaffold_22392
Species: Halococcus thailandensis (100%)
1 1364 bp 52.93 4.62 96.55
qs_1_scaffold_26418
Species: Halococcus salifodinae (50%)
2 1188 bp 52.86 4.63 85.86
qs_1_scaffold_22884
Species: GWB1_Bdellovibrionales_55_8_curated (50%)
2 1340 bp 66.79 4.63 97.39
qs_1_scaffold_30978 4 1036 bp 58.11 4.63 94.69
qs_1_scaffold_31008
Species: RBG_16_Actinobacteria_68_12_curated (50%)
2 1035 bp 60.10 4.64 100.87
qs_1_scaffold_22970 1 1335 bp 48.01 4.64 99.78
qs_1_scaffold_26001
Species: Haloferax elongans (50%)
2 1206 bp 48.51 4.64 76.87
qs_1_scaffold_20935
Species: Stanieria cyanosphaera (50%)
2 1443 bp 41.51 4.64 98.13
qs_1_scaffold_12430
Domain: Bacteria (66.67%)
3 2179 bp 48.28 4.64 98.99
qs_1_scaffold_26993
Species: Pseudomonas syringae (100%)
1 1165 bp 55.62 4.64 99.91
qs_1_scaffold_21707 5 1402 bp 59.13 4.64 61.84
qs_1_scaffold_25485
Class: Halobacteria (66.67%)
3 1225 bp 66.78 4.65 76.65
Displaying items 251-300 of 28378 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.