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QS_2_UNK

In projects: QS_2  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 27.84 Longest contig: 286.04 Kbp Bin length: 41.26 Mbp GC content: 59.97 %
Contigs count: 14256 Features count: 54073 rRNAs count: 12 tRNAs count: 473

Genome completeness

megabin RP 47 / 55 MC: 37 BSCG 45 / 51 MC: 38 ASCG 38 / 38 MC: 38
Displaying items 151-200 of 14256 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_2_scaffold_744 9 9298 bp 54.41 15.43 100.89
qs_2_scaffold_9590
Species: R_NC10_66_22 (50%)
2 1683 bp 62.33 33.27 100.89
qs_2_scaffold_13756
Order: Halobacteriales (66.67%)
3 1243 bp 70.23 11.18 100.89
qs_2_scaffold_13762
Genus: Haloarcula (66.67%)
3 1243 bp 66.05 8.93 100.89
qs_2_scaffold_5190 5 2712 bp 56.64 7.60 100.89
qs_2_scaffold_13723
Species: Haloferax lucentense (100%)
3 1246 bp 59.15 12.52 100.88
qs_2_scaffold_15148
Species: Natrialba hulunbeirensis (50%)
2 1139 bp 54.26 7.55 100.88
qs_2_scaffold_16816
Species: Natronomonas pharaonis (50%)
2 1035 bp 69.95 11.40 100.87
qs_2_scaffold_16655
Species: Haloferax volcanii (100%)
2 1044 bp 60.44 13.12 100.86
qs_2_scaffold_13939
Species: Halococcus salifodinae (66.67%)
3 1746 bp 69.59 32.25 100.86
qs_2_scaffold_16564
Species: Halomicrobium mukohataei (50%)
2 1050 bp 73.81 41.05 100.86
qs_2_scaffold_5434
Order: Halobacteriales (54.55%)
11 3501 bp 65.95 13.80 100.86
qs_2_scaffold_14587
Species: Halococcus hamelinensis (100%)
2 1178 bp 61.63 10.78 100.85
qs_2_scaffold_12003 2 2258 bp 52.57 8.02 100.84
qs_2_scaffold_8286
Species: Haloferax larsenii (50%)
2 2880 bp 59.03 6.04 100.83
qs_2_scaffold_8788 2 1803 bp 52.36 4.94 100.83
qs_2_scaffold_12752
Species: Haloarcula amylolytica (50%)
2 1327 bp 57.95 12.74 100.83
qs_2_scaffold_12731
Genus: Haloarcula (66.67%)
3 1330 bp 64.06 8.72 100.83
qs_2_scaffold_22825
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1458 bp 63.51 5.69 100.82
qs_2_scaffold_11389 4 1464 bp 51.09 9.36 100.82
qs_2_scaffold_17449
Species: Natronomonas pharaonis (100%)
2 1000 bp 68.80 25.70 100.80
qs_2_scaffold_15218
Species: Natronomonas moolapensis (60%)
5 2771 bp 76.58 77.55 100.79
qs_2_scaffold_9810
Species: Haloferax elongans (66.67%)
3 1652 bp 63.32 36.80 100.79
qs_2_scaffold_5824
Species: Methanocaldococcus vulcanius (50%)
2 2977 bp 63.59 122.61 100.77
qs_2_scaffold_3392
Genus: Halococcus (50%)
6 4692 bp 64.32 13.21 100.77
qs_2_scaffold_12853
Species: Natronomonas pharaonis (100%)
3 1319 bp 72.48 18.88 100.76
qs_2_scaffold_16283
Order: Haloferacales (66.67%)
3 1066 bp 73.45 14.92 100.75
qs_2_scaffold_11275
Species: Streptomyces clavuligerus (50%)
2 1477 bp 73.87 5.42 100.74
qs_2_scaffold_31499
Species: Halomicrobium mukohataei (50%)
2 1075 bp 64.74 6.23 100.74
qs_2_scaffold_12247
Species: Haloarcula japonica (100%)
2 1376 bp 47.09 5.31 100.73
qs_2_scaffold_12002
Species: Haloferax mediterranei (50%)
2 1400 bp 50.29 35.14 100.71
qs_2_scaffold_7239
Genus: Haloarcula (100%)
3 2109 bp 66.24 6.35 100.71
qs_2_scaffold_19474
Species: Natronomonas pharaonis (50%)
2 1415 bp 71.52 59.01 100.71
qs_2_scaffold_13291
Species: Halococcus saccharolyticus (100%)
3 1281 bp 70.34 115.93 100.70
qs_2_scaffold_15040
Species: Natronomonas pharaonis (50%)
2 1147 bp 72.97 95.55 100.70
qs_2_scaffold_14976 3 1150 bp 47.83 5.83 100.70
qs_2_scaffold_25182
Species: Halococcus salifodinae (66.67%)
3 1174 bp 68.99 98.62 100.68
qs_2_scaffold_1182 8 11484 bp 46.70 7.02 100.68
qs_2_scaffold_7445 3 2065 bp 58.45 7.55 100.68
qs_2_scaffold_16821
Species: Natronomonas moolapensis (66.67%)
3 1034 bp 75.44 52.90 100.68
qs_2_scaffold_10014
Order: Halobacteriales (66.67%)
3 1627 bp 67.12 6.95 100.68
qs_2_scaffold_16660
Order: Halobacteriales (66.67%)
3 1043 bp 63.76 5.66 100.67
qs_2_scaffold_17930
Species: Natronomonas moolapensis (75%)
4 1642 bp 76.31 97.14 100.67
qs_2_scaffold_7322
Species: Halococcus thailandensis (75%)
4 2092 bp 65.30 10.42 100.67
qs_2_scaffold_13954
Species: Haloarcula sinaiiensis (50%)
2 1225 bp 71.35 136.24 100.65
qs_2_scaffold_7512
Species: Natronomonas moolapensis (50%)
2 2051 bp 67.77 132.72 100.63
qs_2_scaffold_15601 3 1109 bp 63.48 6.04 100.63
qs_2_scaffold_15609
Species: Halococcus thailandensis (50%)
2 1109 bp 54.46 109.29 100.63
qs_2_scaffold_13378
Domain: Bacteria (100%)
3 1273 bp 64.65 31.74 100.63
qs_2_scaffold_11735
Species: Halobiforma lacisalsi (50%)
2 1932 bp 71.33 8.80 100.62
Displaying items 151-200 of 14256 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.