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qs_4_scaffold_11508_2

Organism: QS_4_UNK

megabin RP 49 / 55 MC: 43 BSCG 47 / 51 MC: 44 ASCG 38 / 38 MC: 38
Location: comp(1116..1856)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA12_GEMAT id=5224978 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 243.0
  • Bit_score: 210
  • Evalue 2.60e-51
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 243.0
  • Bit_score: 210
  • Evalue 3.60e-51
pilC; type IV pilus inner membrane protein PilC similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 243.0
  • Bit_score: 191
  • Evalue 2.70e-46

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 741
CGCCACGAGTTGCGGCGCAAGGTGCGCCTGGCGTTTGTGTACCCGGGCCTCGTGTTGACCGTGGCGCTGGGGGCGACGATTTTCCTTCTCGCGGTCATCGTTCCGACCTTCGCGGAGCTTTTTGCGGAGTTTGACGCTGAGCTTCCCCAGGCCACCCAGATAGTCCTTGAAATCAGCCGGGCGATCACGTCGAACTACCTGCTGCTGATCGGTGGAGCCGTAGCCCTCGGGCTGGGAAGCCGAGCGTTCCTCCGGACGGAGACCGGCAGCTACGTCTGGGACACGATCCAAATCAAGACGCCCCTTCTGGGGACGCTCTACCTGAAGGGCATCGTCGCACGGACGTGCCGCACGCTGGGGACCTTGCTCGACAACGGCGTCCCCCTCGACGAGGCCCTCCAGGTCCAGATCGAGGCCGCCGAGAACGTTCACCTGCGGGAGGCCTTCGAGGCGATGAGCCGGGCGGTCCATCGGGGCGACCCGCTGGCGGTCCCCGCCGAGCGGGCGGGGCTTTTCCCCGAGATGATCGTTCAGATGATCCGGGTGGGGGAGGAGACTGCCCAGCTGGGCCCGATGCTCCGGGAGGCGGCCGACCACTACGAGGCGGAAGTGCAGGACACCGCCGACACGCTGGCTTCGATTCTGGAGCCGGTCTTGATCGTTTTCATCGGCGCCCTTTTGGGAAGCATCCTGGTGGCGCTGTACCTGCCGATGTTCGACCTGATGAACGTCGTGCGGTAA
PROTEIN sequence
Length: 247
RHELRRKVRLAFVYPGLVLTVALGATIFLLAVIVPTFAELFAEFDAELPQATQIVLEISRAITSNYLLLIGGAVALGLGSRAFLRTETGSYVWDTIQIKTPLLGTLYLKGIVARTCRTLGTLLDNGVPLDEALQVQIEAAENVHLREAFEAMSRAVHRGDPLAVPAERAGLFPEMIVQMIRVGEETAQLGPMLREAADHYEAEVQDTADTLASILEPVLIVFIGALLGSILVALYLPMFDLMNVVR*