ggKbase home page

qs_4_scaffold_16743_2

Organism: QS_4_UNK

megabin RP 49 / 55 MC: 43 BSCG 47 / 51 MC: 44 ASCG 38 / 38 MC: 38
Location: comp(554..1915)

Top 3 Functional Annotations

Value Algorithm Source
Replication factor C large subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMD6_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 487.0
  • Bit_score: 778
  • Evalue 3.40e-222
Replication factor C large subunit {ECO:0000256|HAMAP-Rule:MF_01508, ECO:0000256|SAAS:SAAS00009874}; Short=RFC large subunit {ECO:0000256|HAMAP-Rule:MF_01508};; Clamp loader large subunit {ECO:0000256 similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 487.0
  • Bit_score: 778
  • Evalue 4.70e-222
replication factor C large subunit similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 485.0
  • Bit_score: 624
  • Evalue 3.00e-176

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1362
ATGGATTGGACCGAGAAGTATCGTCCCTCGACGCTCTCGGAGGTCCGTGGCAACAACAAGGCCAGGGACGCACTCGCAGAGTGGGCCGAGACGTGGGACGCACATGGGGAGGCGGTGATCCTCCACGGCGCGCCGGGCGTCGGCAAGACCTCGGCGGCCCACGCGCTCGCGGCCGACATGGGCTGGCCGACGATCGAGCTCAACGCCTCCGACCAGCGCACGAAGGCGGTCGTCGAGCGGGTCGCGGGCGAGGCCGCGAAATCGGGGACGCTCACCGGCGGGAGCGTGGGCCGACGGCTGGTGATCATGGACGAGGCCGACAACCTTCACGGGAACGTCGACCGTGGCGGCTCGCGCGCGATCACGAGCCTCGTGAAGGAGGCGGGCCAGCCGATGGTGCTCATCGCAAACGAGTTCTACGACATGTCGAACTCCCTGCGGAACGCGTGCGAAACCATCGAGTTCCGGGACGTCTCGGCGCGCTCGATCCTGCCCGTGCTCCGGGACATCTCGGAGGCGAACGAGCGACTCACCGCCGGGGACGTGGTCACCGGCGACCGCGATCGGACCACCGGGATCTTCGACTTCCTCGATGCCCTCATCAAGGAGGAGGACGCGGAGGGCGCGCTGCGGGCCTCCTACGACGTCGACGAGACCCCCGACGACCTCATCAACTGGATCGAGGACAACGTCCCGAAGGACTTCCATGGAGCGGAACTCGCCGACGCCTACGACAGCCTCGCGAACGCGGATCGATGGCTCGGGCGGGTGCGGGCCACTCAGGACTACTCCTACTGGCGCTACGCCGGCGACGCCATGACCGCGGGCGTCGCGGCCGCGCGGCGCGAACCCAAGAGCGGCTGGACCCGGTACGGCCCGCCGAGCTACTGGTCGAAGCTCGGACGCTCACGGGGCACGCGCGACAAACGCGATTACGTCGCCCAGCACATCGCCGAGGTCGGCGGAATGAGCATGGCGAGCGCGCGCAACGACGTCATGCCGTTCCTCTCGGCGATGACCCACCACTGCAGGAACCGGGAGCTGACGGTGACGATGGCCGCGCGGTACGATCTTGAGGCCGAGCACGTCGCCTTCGTCACCGGCAGCGGGGAGGACACCGACAAGGTCCAGGGGATCGTCGCGGATGCCGCGGAGCTGCGCGACGAGGAGGCGGTCTCGCACGCCGAGGGCGCGTTCGAGGGGGCGACACGAACCACCGGGGAACCCGAAACGGGCGACGGTTCGGACGACGAAACGAACGCCGATCCGACCGATACGGAAGGGGAGGGCGACCAGCACCAGGACGCTGGCGACGACTCCGCAGCCGACGACTCCCAGTCCGGTCTCGGGGACTTCTGCTGA
PROTEIN sequence
Length: 454
MDWTEKYRPSTLSEVRGNNKARDALAEWAETWDAHGEAVILHGAPGVGKTSAAHALAADMGWPTIELNASDQRTKAVVERVAGEAAKSGTLTGGSVGRRLVIMDEADNLHGNVDRGGSRAITSLVKEAGQPMVLIANEFYDMSNSLRNACETIEFRDVSARSILPVLRDISEANERLTAGDVVTGDRDRTTGIFDFLDALIKEEDAEGALRASYDVDETPDDLINWIEDNVPKDFHGAELADAYDSLANADRWLGRVRATQDYSYWRYAGDAMTAGVAAARREPKSGWTRYGPPSYWSKLGRSRGTRDKRDYVAQHIAEVGGMSMASARNDVMPFLSAMTHHCRNRELTVTMAARYDLEAEHVAFVTGSGEDTDKVQGIVADAAELRDEEAVSHAEGAFEGATRTTGEPETGDGSDDETNADPTDTEGEGDQHQDAGDDSAADDSQSGLGDFC*