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QS_4_UNK

In projects: QS_4  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 36.18 Longest contig: 272.33 Kbp Bin length: 77.60 Mbp GC content: 61.24 %
Contigs count: 24168 Features count: 98476 rRNAs count: 14 tRNAs count: 809

Genome completeness

megabin RP 49 / 55 MC: 43 BSCG 47 / 51 MC: 44 ASCG 38 / 38 MC: 38
Displaying items 451-500 of 24168 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_4_scaffold_21660
Species: Halorubrum californiense (50%)
2 1152 bp 67.10 5.47 93.75
qs_4_scaffold_10439
Class: Halobacteria (66.67%)
3 1992 bp 42.27 5.47 86.14
qs_4_scaffold_11131
Species: Halosimplex carlsbadense (66.67%)
3 1903 bp 56.33 5.47 98.21
qs_4_scaffold_23831
Species: Halalkalicoccus jeotgali (50%)
2 1061 bp 57.21 5.47 70.12
qs_4_scaffold_23834
Species: Haloterrigena salina (50%)
2 1061 bp 43.26 5.47 92.74
qs_4_scaffold_10744
Species: Halococcus morrhuae (50%)
2 1951 bp 52.43 5.48 95.80
qs_4_scaffold_22522
Species: Natronorubrum sulfidifaciens (50%)
2 1114 bp 55.48 5.48 51.97
qs_4_scaffold_22142 3 1132 bp 46.55 5.48 78.45
qs_4_scaffold_22148 3 1132 bp 62.99 5.48 64.66
qs_4_scaffold_16433 3 1423 bp 59.52 5.48 44.48
qs_4_scaffold_12145
Species: Halogranum salarium (66.67%)
3 1784 bp 61.72 5.49 84.08
qs_4_scaffold_17676 1 1349 bp 52.93 5.49 18.46
qs_4_scaffold_23035
Species: Natrinema versiforme (50%)
2 1093 bp 63.77 5.49 74.11
qs_4_scaffold_22587
Species: Candidatus Halobonum tyrrellensis (50%)
2 1111 bp 60.94 5.49 98.83
qs_4_scaffold_14727
Species: halophilic archaeon J07HX5 (50%)
2 1546 bp 60.48 5.50 89.46
qs_4_scaffold_14737
Species: Halococcus salifodinae (50%)
2 1545 bp 53.79 5.50 96.70
qs_4_scaffold_20987
Species: Halococcus salifodinae (50%)
2 1181 bp 55.46 5.50 98.31
qs_4_scaffold_17071
Species: Natrialba chahannaoensis (50%)
2 1383 bp 64.50 5.50 89.15
qs_4_scaffold_10056 6 2049 bp 65.50 5.51 85.65
qs_4_scaffold_19463
Species: Halococcus salifodinae (100%)
1 1250 bp 58.16 5.52 51.84
qs_4_scaffold_20638 3 1196 bp 63.71 5.52 84.53
qs_4_scaffold_17193 3 1377 bp 57.01 5.52 85.19
qs_4_scaffold_20674 2 1195 bp 44.35 5.52 84.10
qs_4_scaffold_24145
Species: Natrialba taiwanensis (100%)
1 1050 bp 49.90 5.52 57.43
qs_4_scaffold_11012 5 1919 bp 53.41 5.52 68.47
qs_4_scaffold_21467
Species: Salinibacter ruber (50%)
2 1160 bp 57.84 5.52 69.31
qs_4_scaffold_15266
Species: Natronorubrum tibetense (100%)
1 1504 bp 61.70 5.52 63.43
qs_4_scaffold_11152 3 1901 bp 49.34 5.52 85.85
qs_4_scaffold_19920
Species: Haloferax mediterranei (100%)
2 1229 bp 51.75 5.53 99.84
qs_4_scaffold_18815
Species: Haloferax denitrificans (100%)
2 1285 bp 47.00 5.53 99.69
qs_4_scaffold_18131
Species: uncultured archaeon A07HR67 (100%)
1 1321 bp 48.68 5.53 87.66
qs_4_scaffold_12608
Species: Halococcus salifodinae (50%)
2 1736 bp 63.71 5.53 96.43
qs_4_scaffold_23701 3 1067 bp 60.64 5.53 95.88
qs_4_scaffold_22380
Species: Candidatus Halobonum tyrrellensis (50%)
2 1121 bp 66.28 5.53 53.79
qs_4_scaffold_11785 2 1825 bp 53.53 5.53 32.22
qs_4_scaffold_19167
Species: Halorubrum californiense (50%)
2 1265 bp 54.70 5.53 99.84
qs_4_scaffold_19175
Species: Natronorubrum bangense (100%)
1 1265 bp 54.47 5.53 99.84
qs_4_scaffold_21949
Species: Haloferax mediterranei (50%)
2 1140 bp 56.32 5.53 36.32
qs_4_scaffold_15307 3 1500 bp 55.00 5.53 70.80
qs_4_scaffold_14637
Species: Natrinema versiforme (50%)
2 1553 bp 44.82 5.54 99.68
qs_4_scaffold_15351
Species: Scytonema millei (100%)
1 1497 bp 54.11 5.54 100.00
qs_4_scaffold_15123 3 1515 bp 64.69 5.54 88.12
qs_4_scaffold_15608 4 1480 bp 48.92 5.54 80.68
qs_4_scaffold_25312 2 1011 bp 57.96 5.54 26.61
qs_4_scaffold_22426
Species: Halalkalicoccus jeotgali (50%)
2 1119 bp 58.27 5.54 46.92
qs_4_scaffold_12985
Species: Halopiger xanaduensis (50%)
2 1697 bp 43.37 5.54 93.69
qs_4_scaffold_19973
Species: Natrinema versiforme (50%)
2 1226 bp 64.76 5.55 89.80
qs_4_scaffold_7512
Species: Anabaena sp. 90 (100%)
1 2540 bp 46.89 5.55 99.92
qs_4_scaffold_22857
Species: Desulfomonile tiedjei (50%)
2 1100 bp 67.73 5.55 91.64
qs_4_scaffold_23779
Species: Haloquadratum walsbyi (100%)
1 1064 bp 50.85 5.55 79.51
Displaying items 451-500 of 24168 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.