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QS_4_UNK

In projects: QS_4  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 36.18 Longest contig: 272.33 Kbp Bin length: 77.60 Mbp GC content: 61.24 %
Contigs count: 24168 Features count: 98476 rRNAs count: 14 tRNAs count: 809

Genome completeness

megabin RP 49 / 55 MC: 43 BSCG 47 / 51 MC: 44 ASCG 38 / 38 MC: 38
Displaying items 1151-1200 of 24168 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_4_scaffold_2188 10 6930 bp 68.83 15.64 52.90
qs_4_scaffold_1543
Order: Natrialbales (50%)
10 11410 bp 71.37 13.96 87.16
qs_4_scaffold_7246
Species: Halococcus saccharolyticus (60%)
10 9519 bp 65.24 239.09 78.10
qs_4_scaffold_2073
Domain: Bacteria (60%)
10 7289 bp 56.98 137.66 88.32
qs_4_scaffold_1451
Domain: Archaea (60%)
10 10233 bp 59.02 16.72 79.83
qs_4_scaffold_3445
Genus: Natronomonas (50%)
10 8881 bp 67.47 19.25 81.75
qs_4_scaffold_1129 10 12899 bp 54.64 14.28 79.70
qs_4_scaffold_4950
Class: Halobacteria (70%)
10 3489 bp 62.48 15.31 85.98
qs_4_scaffold_2212
Genus: Halococcus (80%)
10 6881 bp 54.25 33.00 71.15
qs_4_scaffold_13135
Class: Halobacteria (80%)
10 6244 bp 64.13 79.34 75.62
qs_4_scaffold_3936
Order: Halobacteriales (50%)
10 10686 bp 64.61 93.47 89.28
qs_4_scaffold_1982
Order: Halobacteriales (50%)
10 7594 bp 58.93 24.02 92.40
qs_4_scaffold_4723 10 3620 bp 63.92 18.51 87.60
qs_4_scaffold_3026
Class: Halobacteria (60%)
10 5173 bp 58.07 14.75 78.18
qs_4_scaffold_7028
Domain: Bacteria (80%)
10 3341 bp 58.04 132.12 73.63
qs_4_scaffold_1314
Order: Natrialbales (60%)
10 11226 bp 56.75 35.49 90.67
qs_4_scaffold_1799 10 8362 bp 48.70 13.48 51.99
qs_4_scaffold_1776
Species: Halalkalicoccus jeotgali (60%)
10 8479 bp 64.34 14.35 98.36
qs_4_scaffold_4737
Species: Salinibacter ruber (80%)
10 5344 bp 64.02 103.50 85.10
qs_4_scaffold_1085
Class: Halobacteria (50%)
10 13229 bp 54.23 19.43 94.97
qs_4_scaffold_1454
Genus: Halococcus (50%)
10 10224 bp 53.54 18.09 70.13
qs_4_scaffold_2537
Class: Halobacteria (70%)
10 9507 bp 51.32 10.30 65.73
qs_4_scaffold_2399
Phylum: Euryarchaeota (50%)
10 6382 bp 51.35 16.19 79.25
qs_4_scaffold_1685
Genus: Natronomonas (50%)
10 8893 bp 71.03 34.89 86.02
qs_4_scaffold_3042 10 5152 bp 56.89 59.65 79.48
qs_4_scaffold_2031
Class: Halobacteria (80%)
10 8571 bp 65.15 77.13 78.31
qs_4_scaffold_2909
Class: Halobacteria (50%)
10 10155 bp 56.28 13.01 79.94
qs_4_scaffold_3178 10 5663 bp 57.65 36.02 75.42
qs_4_scaffold_2910
Order: Halobacteriales (50%)
10 5367 bp 60.59 56.05 77.31
qs_4_scaffold_1202
Species: Haladaptatus paucihalophilus (70%)
10 12779 bp 57.05 83.88 87.47
qs_4_scaffold_3180
Genus: Halococcus (50%)
10 7090 bp 63.23 98.18 85.85
qs_4_scaffold_3471
Order: Halobacteriales (50%)
10 5496 bp 59.55 29.88 73.25
qs_4_scaffold_1041 10 18267 bp 55.25 15.51 72.13
qs_4_scaffold_2124 10 10202 bp 64.48 30.81 91.42
qs_4_scaffold_4146
Domain: Bacteria (60%)
10 5570 bp 61.78 14.09 68.19
qs_4_scaffold_2648 10 5851 bp 58.88 22.20 72.81
qs_4_scaffold_3964 10 8226 bp 62.07 22.09 74.75
qs_4_scaffold_8219
Species: Natronomonas pharaonis (50%)
10 8211 bp 67.39 115.80 78.88
qs_4_scaffold_2539
Class: Halobacteria (60%)
10 7157 bp 67.81 9.29 86.31
qs_4_scaffold_3184
Class: Halobacteria (70%)
10 6021 bp 57.55 42.19 71.95
qs_4_scaffold_2650
Class: Halobacteria (60%)
10 5843 bp 65.41 40.34 79.69
qs_4_scaffold_1779
Class: Halobacteria (60%)
10 8457 bp 67.57 13.14 65.31
qs_4_scaffold_1802
Class: Halobacteria (90%)
10 10246 bp 54.59 11.18 91.35
qs_4_scaffold_1733 10 8647 bp 62.26 30.20 84.72
qs_4_scaffold_8687
Order: Halobacteriales (50%)
10 7429 bp 58.85 60.31 74.38
qs_4_scaffold_1434
Phylum: Bacteroidetes (80%)
10 10341 bp 59.51 12.38 74.38
qs_4_scaffold_2920
Phylum: Bacteroidetes (50%)
10 7296 bp 61.58 11.61 81.17
qs_4_scaffold_7308
Order: Halobacteriales (60%)
10 6243 bp 56.85 11.63 85.49
qs_4_scaffold_1872
Domain: Bacteria (60%)
10 8091 bp 53.17 19.81 76.49
qs_4_scaffold_1389
Genus: Halococcus (60%)
10 10542 bp 58.99 21.69 77.75
Displaying items 1151-1200 of 24168 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.