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qs_7_scaffold_3022_11

Organism: QS_7_UNK

megabin RP 50 / 55 MC: 45 BSCG 50 / 51 MC: 43 ASCG 38 / 38 MC: 38
Location: 5395..6984

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI00037B83AB similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 345.0
  • Bit_score: 216
  • Evalue 6.00e-53
RNA polymerase, sigma subunit, RpsC/SigC similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 424.0
  • Bit_score: 213
  • Evalue 1.40e-52
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.0
  • Coverage: 424.0
  • Bit_score: 213
  • Evalue 7.10e-52

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Taxonomy

Rivularia sp. PCC 7116 → Rivularia → Nostocales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 1590
ATGCTGCGGCAGCGCGTCACTGCGTACTCATCTGCAGGACAGGCAGCGCACAAGCGGTGCTCACACGCATGCCCCGCCACTGCAGAAGCACACGCGCCACCTGAGGAAAGAGAGAGAGAGAAACCAGCACACGACGAGCCAGATTATTCGCATCGCCAGTCGCTCGAGCGCTCTCGCAGGCGCGCACCACCCTCGTCTTTCCGAGCTCGCGGCGAGGGCGCCCGTGGCGCTGAGCTGCGTCGAGTGCGCAACGCCATGGACTCCTATTCCGGACAGAAGCGCTCATCCGACAGCTCGCCCTCATGGACCTCCGACACGCTCCAAATTGCCGCCAGCCTCGGGCTCAATCAAGGCCAAAAGTCCACCGCTGATGTCGTTGCCAACAGCACACAGCACGACGTAAACATGCCCTTCTCGCTTGCTCAGTTCATGCACGACATCCGTAGCACCGATGTGCTCTCCGCTAAGCAGGAGAAGCAGCTCGGTCAGGCTATCAATGAGTACCATGAAATTGAATCTGAACGCAACCGCATCCATGGTGAGCTTGGTCGTGAGCCCTCCGACGGCGAACTTGCTGCAACACGTGGCGTTGATGAAGATGAGCTTCTGCGACTGATTGAGCAGGGCAAGTGGGCAAAGCGGCTTATGGTTGAGCACAACTTGCGCCTTGTTGTTTCGATGGCAAAGAAGTTCACAAAGAAGGGGATGTCGCTGAGCGACTTGATCCAGGAAGGAACCTTTGGGCTGCTTCGTGCGATTGACAAGTTCGACCCAAGCCGGGGCTTCAAGTTCAGCACGTATTGCTATTGGTGGATTCGGCAGTCGATGCAGAAAGCTGTGTATGACCAGACGAGCACGATCCGTGTGCCAATGAATGTTCAGTTCAACTACCAGCGCTTAATGAATGCGCGCAGAAAGCTCATGGCCGAGGGGAAAGAGCCAACCGAACAGACGCTAGCTGAGGAGACAGGTATGAGCGAGGCGAAGGTGTCTGAAACACTGAGCGCGTTCCCCTACACGAACACGCTGGATAGCTCCATGGGTGACCGCGAGGTGAGCAAGTACGATACGGGCGGCGGATACGATGCTGAGCGCCTTTCAAACGCAGGCGGTACAAGTATGGACGAGTTCGAAGAGCGGCGAGACCGGGACCAGCTATCGCAGGACCTGGAAGATTTGCTGGTGACGCTGACGCCCCGCGAGCGCGCGGTGTTACGCATGCGCTACTGCTTGGACAACCGTAGCGAGCCTGTGTCAAACAACGAGCTTGGTCGCATGTTTGGCGTGTCGAAGGAGCGCATCCGGCGCATTGAGCAGAGCGCGCTCACTAAGCTGGCATCACCTGAGCGGGCAGCGTACGTGTCCGATCACCTGCGCGAGCGCGGCATGGTGATATCTGACGAGGTCAGCGCTCAGAATACACAGCCCAGCGCAGACAGCAACGGCAACAAAGTAGCAGCGCAATCCTCAAGGCAAAACGAGAGTGAGAGAGCAGGAAGAACGCAAGGGTCACGCAGAAGGGAATCATCATCATCGTCATCGTCTTCTTCTTCTCCAAAAAGCGAAGCAGGCAGTCAGAGAAGGCAATGA
PROTEIN sequence
Length: 530
MLRQRVTAYSSAGQAAHKRCSHACPATAEAHAPPEEREREKPAHDEPDYSHRQSLERSRRRAPPSSFRARGEGARGAELRRVRNAMDSYSGQKRSSDSSPSWTSDTLQIAASLGLNQGQKSTADVVANSTQHDVNMPFSLAQFMHDIRSTDVLSAKQEKQLGQAINEYHEIESERNRIHGELGREPSDGELAATRGVDEDELLRLIEQGKWAKRLMVEHNLRLVVSMAKKFTKKGMSLSDLIQEGTFGLLRAIDKFDPSRGFKFSTYCYWWIRQSMQKAVYDQTSTIRVPMNVQFNYQRLMNARRKLMAEGKEPTEQTLAEETGMSEAKVSETLSAFPYTNTLDSSMGDREVSKYDTGGGYDAERLSNAGGTSMDEFEERRDRDQLSQDLEDLLVTLTPRERAVLRMRYCLDNRSEPVSNNELGRMFGVSKERIRRIEQSALTKLASPERAAYVSDHLRERGMVISDEVSAQNTQPSADSNGNKVAAQSSRQNESERAGRTQGSRRRESSSSSSSSSSPKSEAGSQRRQ*